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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182991189
OLAP01000004
235097
Bacteroidota
TTT
Lys
>WENV182991221
OLAP01000123
235102
Bacteroidota
CGT
Thr
>WENV182991298
OLAP01001314
267954
Bacteroidota
GCC
Gly
>WENV182991226
OLAP01000136
243025
Bacteroidota
CAT
Met
>WENV182991366
OLAP01004380
338155
Bacteroidota
CTC
Glu
>WENV182991460
OLAP01020783
59689
Bacteroidota
CAG
Leu
>WENV182991188
OLAP01000003
436206
Bacteroidota
TTG
Gln
>WENV182991190
OLAP01000005
338124
Bacteroidota
CCG
Arg
>WENV182991194
OLAP01000011
338132
Bacteroidota
GCA
Cys
>WENV182991218
OLAP01000112
301449
Bacteroidota
CGG
Pro
>WENV182991419
OLAP01012455
303954
Bacteroidota
GCC
Gly
>WENV182991210
OLAP01000051
144656
Bacteroidota
GTG
His
>WENV182991241
OLAP01000252
235207
Bacteroidota
CAT
Met
>WENV182991357
OLAP01003591
144596
Bacteroidota
GGC
Ala
>WENV182991240
OLAP01000225
80607
Bacteroidota
GTA
Tyr
>WENV182991212
OLAP01000062
52358
Bacteroidota
TGA
Ser
>WENV182991220
OLAP01000121
154643
Bacteroidota
CAT
Met
>WENV182991193
OLAP01000009
144590
Bacteroidota
GTT
Asn
>WENV182991200
OLAP01000025
95559
Bacteroidota
TAG
Leu
>WENV182991191
OLAP01000006
419272
Bacteroidota
CTG
Gln
>WENV182991198
OLAP01000012
144655
Bacteroidota
GGC
Ala
>WENV182991459
OLAP01020570
144639
Bacteroidota
GGC
Ala
>WENV182991213
OLAP01000069
139743
Bacteroidota
GGG
Pro
>WENV182991374
OLAP01006037
150485
Bacteroidota
GTT
Asn
>WENV182991224
OLAP01000131
425638
Bacteroidota
CTG
Gln
>WENV182991236
OLAP01000175
353927
Bacteroidota
TTC
Glu
>WENV182991471
OLAP01023341
353927
Bacteroidota
TTC
Glu
>WENV182991365
OLAP01004380
23696
Bacteroidota
GCT
Ser
>WENV182991271
OLAP01000636
414426
Bacteroidota
CTG
Gln
>WENV182991199
OLAP01000024
16224
Bacteroidota
GGA
Ser
>WENV182991192
OLAP01000006
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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