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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182991734
OLAR01002993
24650
Bacillota
TAA
Leu
>WENV182991694
OLAR01001472
196621
Bacillota
GTC
Asp
>WENV182991811
OLAR01007233
309417
Bacillota
GGC
Ala
>WENV182991618
OLAR01000054
37213
Bacillota
TGA
Ser
>WENV182991656
OLAR01000339
144612
Bacillota
TCT
Arg
>WENV182991893
OLAR01017653
18465
Bacillota
GCT
Ser
>WENV182991627
OLAR01000086
44854
Bacillota
TGA
Ser
>WENV182991853
OLAR01011760
235154
Bacillota
GTT
Asn
>WENV182991855
OLAR01011760
429443
Bacillota
GCA
Cys
>WENV182991791
OLAR01005931
239020
Bacillota
TTT
Lys
>WENV182991920
OLAR01023062
235137
Bacillota
TGC
Ala
>WENV182991842
OLAR01010412
10926
Bacillota
CGA
Ser
>WENV182991910
OLAR01021573
37083
Bacillota
TGA
Ser
>WENV182991686
OLAR01001164
429429
Bacillota
CCA
Trp
>WENV182991701
OLAR01001700
11034
Bacillota
GGA
Ser
>WENV182991675
OLAR01000654
235079
Bacillota
GAA
Phe
>WENV182991651
OLAR01000287
338149
Bacillota
CTC
Glu
>WENV182991947
OLAR01031342
39475
Bacillota
TAA
Leu
>WENV182991664
OLAR01000450
287000
Bacillota
GTT
Asn
>WENV182991772
OLAR01004447
162445
Bacillota
CAT
Met
>WENV182991894
OLAR01017859
340081
Bacillota
CCG
Arg
>WENV182991660
OLAR01000378
411547
Bacillota
CTG
Gln
>WENV182991628
OLAR01000086
4624
Bacillota
GCT
Ser
>WENV182991611
OLAR01000031
313164
Bacillota
TTT
Lys
>WENV182991729
OLAR01002530
238745
Bacillota
CTT
Lys
>WENV182991678
OLAR01000850
235095
Bacillota
GGT
Thr
>WENV182991732
OLAR01002781
185292
Bacillota
ACG
Arg
>WENV182991636
OLAR01000154
411549
Bacillota
TTG
Gln
>WENV182991849
OLAR01011278
148188
Bacillota
CCG
Arg
>WENV182991695
OLAR01001541
80612
Bacillota
GTA
Tyr
>WENV182991846
OLAR01011047
241432
Bacillota
TGT
Thr
>WENV182991655
OLAR01000292
235124
Bacillota
TGG
Pro
>WENV182991662
OLAR01000401
338129
Bacillota
TGT
Thr
>WENV182991612
OLAR01000037
144583
Bacillota
ACG
Arg
>WENV182991841
OLAR01010356
238746
Bacillota
CGT
Thr
>WENV182991693
OLAR01001472
235171
Bacillota
CCA
Trp
>WENV182991654
OLAR01000291
58712
Bacillota
CAG
Leu
>WENV182991669
OLAR01000549
245296
Bacillota
CCC
Gly
>WENV182991652
OLAR01000287
272992
Bacillota
CTT
Lys
>WENV182991892
OLAR01017653
16361
Bacillota
TGA
Ser
>WENV182991870
OLAR01013209
299139
Bacillota
TGC
Ala
>WENV182991650
OLAR01000267
144594
Bacillota
CAC
Val
>WENV182991833
OLAR01008636
338131
Bacillota
GCC
Gly
>WENV182991634
OLAR01000141
338128
Bacillota
TTC
Glu
>WENV182991808
OLAR01006826
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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