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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182992895
OLAW01001152
235102
Bacteroidota
CGT
Thr
>WENV182992892
OLAW01000875
338155
Bacteroidota
CTC
Glu
>WENV182992826
OLAW01000007
436206
Bacteroidota
TTG
Gln
>WENV182992847
OLAW01000108
338124
Bacteroidota
CCG
Arg
>WENV182992857
OLAW01000218
338132
Bacteroidota
GCA
Cys
>WENV182992860
OLAW01000241
193809
Bacteroidota
CAT
Met
>WENV182992829
OLAW01000019
301449
Bacteroidota
CGG
Pro
>WENV182992836
OLAW01000063
144656
Bacteroidota
GTG
His
>WENV182992904
OLAW01003143
235207
Bacteroidota
CAT
Met
>WENV182992827
OLAW01000013
143169
Bacteroidota
GGG
Pro
>WENV182992862
OLAW01000273
80607
Bacteroidota
GTA
Tyr
>WENV182992849
OLAW01000116
113604
Bacteroidota
>WENV182992858
OLAW01000240
144590
Bacteroidota
GTT
Asn
>WENV182992859
OLAW01000240
144590
Bacteroidota
GTT
Asn
>WENV182992870
OLAW01000466
95559
Bacteroidota
TAG
Leu
>WENV182992833
OLAW01000048
56823
Bacteroidota
TGA
Ser
>WENV182992839
OLAW01000067
56823
Bacteroidota
TGA
Ser
>WENV182992832
OLAW01000042
16224
Bacteroidota
GGA
Ser
>WENV182992852
OLAW01000123
16220
Bacteroidota
GGA
Ser
>WENV182992834
OLAW01000056
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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