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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182994127
OLBB01008713
196621
Bacillota
GTC
Asp
>WENV182994074
OLBB01003930
309417
Bacillota
GGC
Ala
>WENV182993952
OLBB01000398
144612
Bacillota
TCT
Arg
>WENV182994160
OLBB01015520
144612
Bacillota
TCT
Arg
>WENV182994006
OLBB01001310
235134
Bacillota
GAA
Phe
>WENV182993935
OLBB01000205
235098
Bacillota
GAC
Val
>WENV182993917
OLBB01000072
148239
Bacillota
TCT
Arg
>WENV182993988
OLBB01001021
44854
Bacillota
TGA
Ser
>WENV182993925
OLBB01000137
37071
Bacillota
TGA
Ser
>WENV182994071
OLBB01003723
304022
Bacillota
GCC
Gly
>WENV182993897
OLBB01000024
59312
Bacillota
CAG
Leu
>WENV182993951
OLBB01000394
59312
Bacillota
CAG
Leu
>WENV182993923
OLBB01000088
238910
Bacillota
CTT
Lys
>WENV182993886
OLBB01000001
338147
Bacillota
CTC
Glu
>WENV182993887
OLBB01000001
338147
Bacillota
CTC
Glu
>WENV182993888
OLBB01000001
338147
Bacillota
CTC
Glu
>WENV182993902
OLBB01000035
338147
Bacillota
CTC
Glu
>WENV182993984
OLBB01000949
338147
Bacillota
CTC
Glu
>WENV182994110
OLBB01006807
235114
Bacillota
TTT
Lys
>WENV182993942
OLBB01000282
429429
Bacillota
CCA
Trp
>WENV182994063
OLBB01003098
313454
Bacillota
GAA
Phe
>WENV182994001
OLBB01001237
41154
Bacillota
TAA
Leu
>WENV182994008
OLBB01001317
44859
Bacillota
AAG
Leu
>WENV182994064
OLBB01003230
11034
Bacillota
GGA
Ser
>WENV182994003
OLBB01001258
173314
Bacillota
GAT
Ile
>WENV182993927
OLBB01000142
338149
Bacillota
CTC
Glu
>WENV182993976
OLBB01000783
245298
Bacillota
CGG
Pro
>WENV182994022
OLBB01001825
37269
Bacillota
TGA
Ser
>WENV182993904
OLBB01000043
100326
Bacillota
GTA
Tyr
>WENV182993912
OLBB01000072
100326
Bacillota
GTA
Tyr
>WENV182993918
OLBB01000072
144610
Bacillota
GTG
His
>WENV182994007
OLBB01001310
240017
Bacillota
GCC
Gly
>WENV182993975
OLBB01000783
411547
Bacillota
CTG
Gln
>WENV182994028
OLBB01001983
147684
Bacillota
ACG
Arg
>WENV182994004
OLBB01001310
263765
Bacillota
TAC
Val
>WENV182994154
OLBB01013601
411584
Bacillota
TCC
Gly
>WENV182994034
OLBB01002276
411549
Bacillota
TTG
Gln
>WENV182993936
OLBB01000209
235142
Bacillota
CTT
Lys
>WENV182994011
OLBB01001511
235142
Bacillota
CTT
Lys
>WENV182993930
OLBB01000156
148188
Bacillota
CCG
Arg
>WENV182994066
OLBB01003304
80612
Bacillota
GTA
Tyr
>WENV182993924
OLBB01000098
235124
Bacillota
TGG
Pro
>WENV182993978
OLBB01000847
338129
Bacillota
TGT
Thr
>WENV182993967
OLBB01000586
144583
Bacillota
ACG
Arg
>WENV182994126
OLBB01008713
235171
Bacillota
CCA
Trp
>WENV182993948
OLBB01000353
144621
Bacillota
GTT
Asn
>WENV182993921
OLBB01000080
235113
Bacillota
GAA
Phe
>WENV182993903
OLBB01000038
58712
Bacillota
CAG
Leu
>WENV182994013
OLBB01001519
245296
Bacillota
CCC
Gly
>WENV182993928
OLBB01000142
272992
Bacillota
CTT
Lys
>WENV182994031
OLBB01002095
144594
Bacillota
CAC
Val
>WENV182993996
OLBB01001198
95563
Bacillota
GTA
Tyr
>WENV182994135
OLBB01010126
414486
Bacillota
CCC
Gly
>WENV182994021
OLBB01001778
114075
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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