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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182995847
OLBJ01003420
196621
Bacillota
GTC
Asp
>WENV182995913
OLBJ01008158
309417
Bacillota
GGC
Ala
>WENV182995721
OLBJ01000058
144612
Bacillota
TCT
Arg
>WENV182995797
OLBJ01001441
144612
Bacillota
TCT
Arg
>WENV182995757
OLBJ01000340
235134
Bacillota
GAA
Phe
>WENV182995713
OLBJ01000039
235098
Bacillota
GAC
Val
>WENV182995764
OLBJ01000408
148239
Bacillota
TCT
Arg
>WENV182995714
OLBJ01000044
44854
Bacillota
TGA
Ser
>WENV182995752
OLBJ01000303
37071
Bacillota
TGA
Ser
>WENV182995843
OLBJ01003164
304022
Bacillota
GCC
Gly
>WENV182995731
OLBJ01000105
59312
Bacillota
CAG
Leu
>WENV182995780
OLBJ01000746
238910
Bacillota
CTT
Lys
>WENV182995700
OLBJ01000002
338147
Bacillota
CTC
Glu
>WENV182995703
OLBJ01000009
338147
Bacillota
CTC
Glu
>WENV182995754
OLBJ01000310
338147
Bacillota
CTC
Glu
>WENV182995759
OLBJ01000357
338147
Bacillota
CTC
Glu
>WENV182995790
OLBJ01001284
235294
Bacillota
TGC
Ala
>WENV182995701
OLBJ01000004
293599
Bacillota
CTT
Lys
>WENV182995743
OLBJ01000214
429429
Bacillota
CCA
Trp
>WENV182995855
OLBJ01003690
44859
Bacillota
AAG
Leu
>WENV182995820
OLBJ01002011
11034
Bacillota
GGA
Ser
>WENV182995846
OLBJ01003420
235117
Bacillota
TAC
Val
>WENV182995811
OLBJ01001812
338149
Bacillota
CTC
Glu
>WENV182995835
OLBJ01002880
155089
Bacillota
CAT
Met
>WENV182995840
OLBJ01002940
152492
Bacillota
GGG
Pro
>WENV182995872
OLBJ01004972
153911
Bacillota
GAT
Ile
>WENV182995706
OLBJ01000021
100326
Bacillota
GTA
Tyr
>WENV182995866
OLBJ01004357
100326
Bacillota
GTA
Tyr
>WENV182995765
OLBJ01000408
144610
Bacillota
GTG
His
>WENV182995758
OLBJ01000340
240017
Bacillota
GCC
Gly
>WENV182995876
OLBJ01005395
411547
Bacillota
CTG
Gln
>WENV182995951
OLBJ01013711
147684
Bacillota
ACG
Arg
>WENV182995715
OLBJ01000044
4624
Bacillota
GCT
Ser
>WENV182995848
OLBJ01003420
235095
Bacillota
GGT
Thr
>WENV182995915
OLBJ01008301
235289
Bacillota
GTT
Asn
>WENV182995729
OLBJ01000075
411549
Bacillota
TTG
Gln
>WENV182995919
OLBJ01008928
411549
Bacillota
TTG
Gln
>WENV182995779
OLBJ01000722
235142
Bacillota
CTT
Lys
>WENV182995786
OLBJ01000996
148188
Bacillota
CCG
Arg
>WENV182995813
OLBJ01001825
235124
Bacillota
TGG
Pro
>WENV182995796
OLBJ01001438
338129
Bacillota
TGT
Thr
>WENV182995875
OLBJ01005353
338129
Bacillota
TGT
Thr
>WENV182995728
OLBJ01000074
144583
Bacillota
ACG
Arg
>WENV182995776
OLBJ01000602
247734
Bacillota
TGC
Ala
>WENV182995812
OLBJ01001812
144621
Bacillota
GTT
Asn
>WENV182995788
OLBJ01001130
58712
Bacillota
CAG
Leu
>WENV182995833
OLBJ01002871
245296
Bacillota
CCC
Gly
>WENV182995853
OLBJ01003572
272992
Bacillota
CTT
Lys
>WENV182995808
OLBJ01001727
144594
Bacillota
CAC
Val
>WENV182995747
OLBJ01000271
95563
Bacillota
GTA
Tyr
>WENV182995955
OLBJ01015458
114075
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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