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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182996809
OLBO01000018
235097
Bacteroidota
TTT
Lys
>WENV182996851
OLBO01000153
95987
Bacteroidota
CAA
Leu
>WENV182996805
OLBO01000010
339412
Bacteroidota
GGT
Thr
>WENV182996904
OLBO01000687
235102
Bacteroidota
CGT
Thr
>WENV182997103
OLBO01014605
144657
Bacteroidota
CGG
Pro
>WENV182997068
OLBO01008732
243025
Bacteroidota
CAT
Met
>WENV182997169
OLBO01025026
338155
Bacteroidota
CTC
Glu
>WENV182997061
OLBO01008418
153993
Bacteroidota
GAT
Ile
>WENV182997087
OLBO01011319
17323
Bacteroidota
GGA
Ser
>WENV182997159
OLBO01022870
338486
Bacteroidota
CAT
Met
>WENV182996819
OLBO01000039
413663
Bacteroidota
CTG
Gln
>WENV182996820
OLBO01000039
413663
Bacteroidota
CTG
Gln
>WENV182996833
OLBO01000071
415410
Bacteroidota
TTG
Gln
>WENV182996806
OLBO01000010
237797
Bacteroidota
CCA
Trp
>WENV182996821
OLBO01000042
412479
Bacteroidota
TTG
Gln
>WENV182996979
OLBO01002843
80835
Bacteroidota
GTA
Tyr
>WENV182997094
OLBO01012640
80835
Bacteroidota
GTA
Tyr
>WENV182997110
OLBO01015393
237247
Bacteroidota
TTT
Lys
>WENV182996810
OLBO01000020
338124
Bacteroidota
CCG
Arg
>WENV182997173
OLBO01026065
148575
Bacteroidota
CAT
Met
>WENV182996867
OLBO01000273
338132
Bacteroidota
GCA
Cys
>WENV182996828
OLBO01000061
45423
Bacteroidota
TGA
Ser
>WENV182996834
OLBO01000073
37076
Bacteroidota
TAA
Leu
>WENV182997111
OLBO01015401
58714
Bacteroidota
CAA
Leu
>WENV182997106
OLBO01014993
235165
Bacteroidota
CCA
Trp
>WENV182996817
OLBO01000036
144656
Bacteroidota
GTG
His
>WENV182996845
OLBO01000113
235207
Bacteroidota
CAT
Met
>WENV182997079
OLBO01009981
144659
Bacteroidota
GTG
His
>WENV182996823
OLBO01000044
80607
Bacteroidota
GTA
Tyr
>WENV182996827
OLBO01000052
344769
Bacteroidota
CTC
Glu
>WENV182997074
OLBO01009010
80614
Bacteroidota
>WENV182997006
OLBO01003978
154643
Bacteroidota
CAT
Met
>WENV182996816
OLBO01000031
144590
Bacteroidota
GTT
Asn
>WENV182996857
OLBO01000220
95559
Bacteroidota
TAG
Leu
>WENV182997170
OLBO01025287
144655
Bacteroidota
GGC
Ala
>WENV182997109
OLBO01015340
144639
Bacteroidota
GGC
Ala
>WENV182997128
OLBO01016798
95875
Bacteroidota
TAG
Leu
>WENV182997015
OLBO01005191
240012
Bacteroidota
CCC
Gly
>WENV182997063
OLBO01008434
150485
Bacteroidota
GTT
Asn
>WENV182997168
OLBO01024629
342206
Bacteroidota
TTC
Glu
>WENV182996920
OLBO01000869
414426
Bacteroidota
CTG
Gln
>WENV182996869
OLBO01000299
146764
Bacteroidota
GTC
Asp
>WENV182996870
OLBO01000299
146764
Bacteroidota
GTC
Asp
>WENV182996831
OLBO01000064
16224
Bacteroidota
GGA
Ser
>WENV182996836
OLBO01000078
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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