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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182998337
OLBT01000483
235097
Bacteroidota
TTT
Lys
>WENV182998317
OLBT01000157
243025
Bacteroidota
CAT
Met
>WENV182998331
OLBT01000368
338155
Bacteroidota
CTC
Glu
>WENV182998329
OLBT01000337
17323
Bacteroidota
GGA
Ser
>WENV182998344
OLBT01000825
415410
Bacteroidota
TTG
Gln
>WENV182998290
OLBT01000009
80835
Bacteroidota
GTA
Tyr
>WENV182998300
OLBT01000030
80835
Bacteroidota
GTA
Tyr
>WENV182998327
OLBT01000302
80835
Bacteroidota
GTA
Tyr
>WENV182998353
OLBT01001079
344692
Bacteroidota
GGT
Thr
>WENV182998316
OLBT01000128
341950
Bacteroidota
>WENV182998297
OLBT01000023
338132
Bacteroidota
GCA
Cys
>WENV182998341
OLBT01000700
149691
Bacteroidota
GTT
Asn
>WENV182998342
OLBT01000703
149691
Bacteroidota
GTT
Asn
>WENV182998304
OLBT01000057
235207
Bacteroidota
CAT
Met
>WENV182998319
OLBT01000212
414426
Bacteroidota
CTG
Gln
>WENV182998295
OLBT01000013
16224
Bacteroidota
GGA
Ser
>WENV182998325
OLBT01000247
16224
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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