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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183000481
OLCF01000030
235097
Bacteroidota
TTT
Lys
>WENV183000499
OLCF01000067
235102
Bacteroidota
CGT
Thr
>WENV183000465
OLCF01000007
436206
Bacteroidota
TTG
Gln
>WENV183000463
OLCF01000003
338124
Bacteroidota
CCG
Arg
>WENV183000483
OLCF01000032
338132
Bacteroidota
GCA
Cys
>WENV183000492
OLCF01000046
193809
Bacteroidota
CAT
Met
>WENV183000466
OLCF01000010
301449
Bacteroidota
CGG
Pro
>WENV183000502
OLCF01000088
144656
Bacteroidota
GTG
His
>WENV183000494
OLCF01000049
235207
Bacteroidota
CAT
Met
>WENV183000490
OLCF01000044
143169
Bacteroidota
GGG
Pro
>WENV183000473
OLCF01000020
80607
Bacteroidota
GTA
Tyr
>WENV183000487
OLCF01000035
80607
Bacteroidota
GTA
Tyr
>WENV183000484
OLCF01000035
144590
Bacteroidota
GTT
Asn
>WENV183000485
OLCF01000035
144590
Bacteroidota
GTT
Asn
>WENV183000475
OLCF01000022
95559
Bacteroidota
TAG
Leu
>WENV183000468
OLCF01000012
144655
Bacteroidota
GGC
Ala
>WENV183000470
OLCF01000014
56823
Bacteroidota
TGA
Ser
>WENV183000505
OLCF01000109
56823
Bacteroidota
TGA
Ser
>WENV183000498
OLCF01000066
16224
Bacteroidota
GGA
Ser
>WENV183000496
OLCF01000061
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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