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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183002093
OLCN01000658
37213
Bacillota
TGA
Ser
>WENV183002083
OLCN01000447
144612
Bacillota
TCT
Arg
>WENV183002078
OLCN01000347
235098
Bacillota
GAC
Val
>WENV183002248
OLCN01010533
44854
Bacillota
TGA
Ser
>WENV183002109
OLCN01000964
144668
Bacillota
GTC
Asp
>WENV183002105
OLCN01000957
429429
Bacillota
CCA
Trp
>WENV183002110
OLCN01000964
41154
Bacillota
TAA
Leu
>WENV183002283
OLCN01015923
44859
Bacillota
AAG
Leu
>WENV183002155
OLCN01002605
11034
Bacillota
GGA
Ser
>WENV183002119
OLCN01001131
274189
Bacillota
TGT
Thr
>WENV183002121
OLCN01001145
235079
Bacillota
GAA
Phe
>WENV183002081
OLCN01000383
245298
Bacillota
CGG
Pro
>WENV183002143
OLCN01002259
287000
Bacillota
GTT
Asn
>WENV183002272
OLCN01014694
169968
Bacillota
CAT
Met
>WENV183002080
OLCN01000383
411547
Bacillota
CTG
Gln
>WENV183002228
OLCN01007092
147684
Bacillota
ACG
Arg
>WENV183002249
OLCN01010533
4624
Bacillota
GCT
Ser
>WENV183002069
OLCN01000165
412387
Bacillota
GCA
Cys
>WENV183002316
OLCN01021952
248683
Bacillota
TTT
Lys
>WENV183002071
OLCN01000204
235095
Bacillota
GGT
Thr
>WENV183002137
OLCN01001930
411549
Bacillota
TTG
Gln
>WENV183002255
OLCN01010899
235142
Bacillota
CTT
Lys
>WENV183002156
OLCN01002613
148188
Bacillota
CCG
Arg
>WENV183002139
OLCN01001991
235127
Bacillota
TTT
Lys
>WENV183002313
OLCN01021816
298620
Bacillota
CAT
Met
>WENV183002072
OLCN01000226
235124
Bacillota
TGG
Pro
>WENV183002076
OLCN01000312
338129
Bacillota
TGT
Thr
>WENV183002070
OLCN01000191
144583
Bacillota
ACG
Arg
>WENV183002152
OLCN01002403
144621
Bacillota
GTT
Asn
>WENV183002287
OLCN01017104
243098
Bacillota
GGT
Thr
>WENV183002064
OLCN01000122
58712
Bacillota
CAG
Leu
>WENV183002086
OLCN01000479
245296
Bacillota
CCC
Gly
>WENV183002297
OLCN01019140
248965
Bacillota
GCC
Gly
>WENV183002278
OLCN01015540
95563
Bacillota
GTA
Tyr
>WENV183002307
OLCN01020872
272488
Bacillota
GAA
Phe
>WENV183002062
OLCN01000083
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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