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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183002386
OLCO01000352
196621
Bacillota
GTC
Asp
>WENV183002356
OLCO01000070
144612
Bacillota
TCT
Arg
>WENV183002420
OLCO01000966
235098
Bacillota
GAC
Val
>WENV183002588
OLCO01017841
338152
Bacillota
TTC
Glu
>WENV183002431
OLCO01001271
44854
Bacillota
TGA
Ser
>WENV183002595
OLCO01020162
235150
Bacillota
TGC
Ala
>WENV183002439
OLCO01001690
340802
Bacillota
TTG
Gln
>WENV183002430
OLCO01001093
429429
Bacillota
CCA
Trp
>WENV183002504
OLCO01005486
44859
Bacillota
AAG
Leu
>WENV183002487
OLCO01004422
11034
Bacillota
GGA
Ser
>WENV183002569
OLCO01013917
295714
Bacillota
GCC
Gly
>WENV183002352
OLCO01000049
245298
Bacillota
CGG
Pro
>WENV183002590
OLCO01018110
37269
Bacillota
TGA
Ser
>WENV183002587
OLCO01017841
287000
Bacillota
GTT
Asn
>WENV183002351
OLCO01000049
411547
Bacillota
CTG
Gln
>WENV183002417
OLCO01000903
147684
Bacillota
ACG
Arg
>WENV183002432
OLCO01001271
4624
Bacillota
GCT
Ser
>WENV183002387
OLCO01000352
235095
Bacillota
GGT
Thr
>WENV183002426
OLCO01001046
235095
Bacillota
GGT
Thr
>WENV183002433
OLCO01001475
411549
Bacillota
TTG
Gln
>WENV183002555
OLCO01011780
235142
Bacillota
CTT
Lys
>WENV183002400
OLCO01000531
148188
Bacillota
CCG
Arg
>WENV183002365
OLCO01000142
235127
Bacillota
TTT
Lys
>WENV183002427
OLCO01001052
235124
Bacillota
TGG
Pro
>WENV183002437
OLCO01001642
338129
Bacillota
TGT
Thr
>WENV183002388
OLCO01000365
144583
Bacillota
ACG
Arg
>WENV183002398
OLCO01000502
58712
Bacillota
CAG
Leu
>WENV183002444
OLCO01001895
245296
Bacillota
CCC
Gly
>WENV183002520
OLCO01007347
272992
Bacillota
CTT
Lys
>WENV183002622
OLCO01029172
196632
Bacillota
GTC
Asp
>WENV183002408
OLCO01000659
144594
Bacillota
CAC
Val
>WENV183002443
OLCO01001851
95563
Bacillota
GTA
Tyr
>WENV183002364
OLCO01000142
272488
Bacillota
GAA
Phe
>WENV183002371
OLCO01000171
338128
Bacillota
TTC
Glu
>WENV183002404
OLCO01000605
338128
Bacillota
TTC
Glu
>WENV183002623
OLCO01029172
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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