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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183004277
OLCU01023767
144589
Actinomycetota
ACG
Arg
>WENV183004246
OLCU01018104
37070
Actinomycetota
CGA
Ser
>WENV183004175
OLCU01008153
145423
Actinomycetota
TCT
Arg
>WENV183004142
OLCU01004608
254857
Actinomycetota
CCG
Arg
>WENV183004252
OLCU01018926
44942
Actinomycetota
TGA
Ser
>WENV183004133
OLCU01004149
338148
Actinomycetota
CTG
Gln
>WENV183004290
OLCU01026277
411554
Actinomycetota
CCC
Gly
>WENV183004174
OLCU01008109
113601
Actinomycetota
TAG
Leu
>WENV183004221
OLCU01015145
145343
Actinomycetota
GGG
Pro
>WENV183004132
OLCU01003930
145269
Actinomycetota
CAT
Met
>WENV183004173
OLCU01008109
235121
Actinomycetota
CGT
Thr
>WENV183004316
OLCU01034338
144635
Actinomycetota
TGG
Pro
>WENV183004301
OLCU01029796
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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