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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183004658
OLCV01026465
202812
Bacillota
CAT
Met
>WENV183004438
OLCV01000717
309417
Bacillota
GGC
Ala
>WENV183004453
OLCV01001224
309417
Bacillota
GGC
Ala
>WENV183004421
OLCV01000399
235098
Bacillota
GAC
Val
>WENV183004441
OLCV01000869
235098
Bacillota
GAC
Val
>WENV183004563
OLCV01008294
338152
Bacillota
TTC
Glu
>WENV183004641
OLCV01021645
235154
Bacillota
GTT
Asn
>WENV183004512
OLCV01004123
304022
Bacillota
GCC
Gly
>WENV183004672
OLCV01029449
238910
Bacillota
CTT
Lys
>WENV183004524
OLCV01004792
340802
Bacillota
TTG
Gln
>WENV183004590
OLCV01012733
293599
Bacillota
CTT
Lys
>WENV183004506
OLCV01003620
313454
Bacillota
GAA
Phe
>WENV183004468
OLCV01001641
11034
Bacillota
GGA
Ser
>WENV183004527
OLCV01005117
11034
Bacillota
GGA
Ser
>WENV183004513
OLCV01004123
235117
Bacillota
TAC
Val
>WENV183004339
OLCV01000009
235079
Bacillota
GAA
Phe
>WENV183004428
OLCV01000533
245298
Bacillota
CGG
Pro
>WENV183004562
OLCV01008294
287000
Bacillota
GTT
Asn
>WENV183004646
OLCV01022713
162445
Bacillota
CAT
Met
>WENV183004337
OLCV01000009
235078
Bacillota
TAC
Val
>WENV183004424
OLCV01000486
411547
Bacillota
CTG
Gln
>WENV183004427
OLCV01000533
411547
Bacillota
CTG
Gln
>WENV183004606
OLCV01014161
235095
Bacillota
GGT
Thr
>WENV183004676
OLCV01030877
235142
Bacillota
CTT
Lys
>WENV183004450
OLCV01001126
148188
Bacillota
CCG
Arg
>WENV183004548
OLCV01006587
148188
Bacillota
CCG
Arg
>WENV183004437
OLCV01000717
80612
Bacillota
GTA
Tyr
>WENV183004343
OLCV01000010
298620
Bacillota
CAT
Met
>WENV183004454
OLCV01001260
235124
Bacillota
TGG
Pro
>WENV183004554
OLCV01006753
345314
Bacillota
TTG
Gln
>WENV183004416
OLCV01000313
144583
Bacillota
ACG
Arg
>WENV183004522
OLCV01004792
144672
Bacillota
TCT
Arg
>WENV183004429
OLCV01000549
235171
Bacillota
CCA
Trp
>WENV183004415
OLCV01000308
144621
Bacillota
GTT
Asn
>WENV183004443
OLCV01000897
144621
Bacillota
GTT
Asn
>WENV183004595
OLCV01013006
243098
Bacillota
GGT
Thr
>WENV183004497
OLCV01003065
245296
Bacillota
CCC
Gly
>WENV183004543
OLCV01006188
196632
Bacillota
GTC
Asp
>WENV183004459
OLCV01001426
144594
Bacillota
CAC
Val
>WENV183004668
OLCV01027973
95563
Bacillota
GTA
Tyr
>WENV183004365
OLCV01000042
338127
Bacillota
TTG
Gln
>WENV183004637
OLCV01021164
414486
Bacillota
CCC
Gly
>WENV183004544
OLCV01006188
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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