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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183005724
OLDB01000623
196621
Bacillota
GTC
Asp
>WENV183005750
OLDB01001593
144612
Bacillota
TCT
Arg
>WENV183005845
OLDB01012208
144612
Bacillota
TCT
Arg
>WENV183005729
OLDB01000655
44854
Bacillota
TGA
Ser
>WENV183005722
OLDB01000614
238910
Bacillota
CTT
Lys
>WENV183005817
OLDB01007669
11034
Bacillota
GGA
Ser
>WENV183005802
OLDB01006041
235079
Bacillota
GAA
Phe
>WENV183005716
OLDB01000462
338149
Bacillota
CTC
Glu
>WENV183005714
OLDB01000454
245298
Bacillota
CGG
Pro
>WENV183005713
OLDB01000454
411547
Bacillota
CTG
Gln
>WENV183005730
OLDB01000655
4624
Bacillota
GCT
Ser
>WENV183005725
OLDB01000623
235095
Bacillota
GGT
Thr
>WENV183005754
OLDB01001854
411549
Bacillota
TTG
Gln
>WENV183005766
OLDB01002642
148188
Bacillota
CCG
Arg
>WENV183005743
OLDB01001435
80612
Bacillota
GTA
Tyr
>WENV183005759
OLDB01002044
235124
Bacillota
TGG
Pro
>WENV183005736
OLDB01001004
144583
Bacillota
ACG
Arg
>WENV183005810
OLDB01007141
247734
Bacillota
TGC
Ala
>WENV183005717
OLDB01000462
144621
Bacillota
GTT
Asn
>WENV183005705
OLDB01000234
58712
Bacillota
CAG
Leu
>WENV183005748
OLDB01001564
272992
Bacillota
CTT
Lys
>WENV183005863
OLDB01017113
144594
Bacillota
CAC
Val
>WENV183005727
OLDB01000653
249259
Bacillota
GCC
Gly
>WENV183005762
OLDB01002208
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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