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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183009858
OLDS01000639
235097
Bacteroidota
TTT
Lys
>WENV183009810
OLDS01000094
235102
Bacteroidota
CGT
Thr
>WENV183009972
OLDS01005464
267954
Bacteroidota
GCC
Gly
>WENV183010018
OLDS01010042
243025
Bacteroidota
CAT
Met
>WENV183009838
OLDS01000352
338155
Bacteroidota
CTC
Glu
>WENV183009825
OLDS01000230
95618
Bacteroidota
TAG
Leu
>WENV183009799
OLDS01000055
48053
Bacteroidota
TGA
Ser
>WENV183009820
OLDS01000187
48053
Bacteroidota
TGA
Ser
>WENV183009836
OLDS01000332
48053
Bacteroidota
TGA
Ser
>WENV183009840
OLDS01000377
48053
Bacteroidota
TGA
Ser
>WENV183009763
OLDS01000003
415410
Bacteroidota
TTG
Gln
>WENV183009850
OLDS01000537
415410
Bacteroidota
TTG
Gln
>WENV183009819
OLDS01000182
411543
Bacteroidota
CTG
Gln
>WENV183010038
OLDS01014461
344692
Bacteroidota
GGT
Thr
>WENV183009833
OLDS01000298
235182
Bacteroidota
>WENV183009956
OLDS01003783
341950
Bacteroidota
>WENV183009865
OLDS01000877
272983
Bacteroidota
CGT
Thr
>WENV183009774
OLDS01000015
338124
Bacteroidota
CCG
Arg
>WENV183009760
OLDS01000002
338132
Bacteroidota
GCA
Cys
>WENV183009816
OLDS01000144
338132
Bacteroidota
GCA
Cys
>WENV183009829
OLDS01000260
338132
Bacteroidota
GCA
Cys
>WENV183009839
OLDS01000371
338132
Bacteroidota
GCA
Cys
>WENV183009862
OLDS01000836
144688
Bacteroidota
CAT
Met
>WENV183009780
OLDS01000021
144656
Bacteroidota
GTG
His
>WENV183009779
OLDS01000019
235207
Bacteroidota
CAT
Met
>WENV183009878
OLDS01001074
235207
Bacteroidota
CAT
Met
>WENV183009812
OLDS01000130
144596
Bacteroidota
GGC
Ala
>WENV183009938
OLDS01002813
144596
Bacteroidota
GGC
Ala
>WENV183009975
OLDS01005530
16999
Bacteroidota
GGA
Ser
>WENV183010025
OLDS01012004
154643
Bacteroidota
CAT
Met
>WENV183009805
OLDS01000078
144590
Bacteroidota
GTT
Asn
>WENV183009831
OLDS01000287
95559
Bacteroidota
TAG
Leu
>WENV183009768
OLDS01000010
419272
Bacteroidota
CTG
Gln
>WENV183009803
OLDS01000071
144655
Bacteroidota
GGC
Ala
>WENV183009811
OLDS01000105
338314
Bacteroidota
CCT
Arg
>WENV183009767
OLDS01000010
132360
Bacteroidota
GGG
Pro
>WENV183009798
OLDS01000054
132360
Bacteroidota
GGG
Pro
>WENV183009933
OLDS01002625
132360
Bacteroidota
GGG
Pro
>WENV183009791
OLDS01000033
239647
Bacteroidota
TTT
Lys
>WENV183009804
OLDS01000075
239647
Bacteroidota
TTT
Lys
>WENV183009918
OLDS01001921
353927
Bacteroidota
TTC
Glu
>WENV183009950
OLDS01003184
414426
Bacteroidota
CTG
Gln
>WENV183009781
OLDS01000021
16224
Bacteroidota
GGA
Ser
>WENV183009769
OLDS01000010
16220
Bacteroidota
GGA
Ser
>WENV183009775
OLDS01000017
338125
Bacteroidota
CCT
Arg
>WENV183010037
OLDS01013567
235129
Bacteroidota
GCC
Gly
>WENV183009824
OLDS01000217
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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