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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183012351
OLEC01003686
235102
Bacteroidota
CGT
Thr
>WENV183012336
OLEC01003065
243025
Bacteroidota
CAT
Met
>WENV183012410
OLEC01006551
338155
Bacteroidota
CTC
Glu
>WENV183012438
OLEC01008207
436206
Bacteroidota
TTG
Gln
>WENV183012362
OLEC01004304
338132
Bacteroidota
GCA
Cys
>WENV183012257
OLEC01000787
301449
Bacteroidota
CGG
Pro
>WENV183012281
OLEC01001730
144933
Bacteroidota
TCT
Arg
>WENV183012383
OLEC01005284
235207
Bacteroidota
CAT
Met
>WENV183012521
OLEC01029411
235180
Bacteroidota
CCA
Trp
>WENV183012359
OLEC01004148
80607
Bacteroidota
GTA
Tyr
>WENV183012274
OLEC01001484
52358
Bacteroidota
TGA
Ser
>WENV183012464
OLEC01014437
52358
Bacteroidota
TGA
Ser
>WENV183012350
OLEC01003435
154643
Bacteroidota
CAT
Met
>WENV183012363
OLEC01004330
338164
Bacteroidota
TTC
Glu
>WENV183012330
OLEC01002768
139743
Bacteroidota
GGG
Pro
>WENV183012367
OLEC01004556
338165
Bacteroidota
GGT
Thr
>WENV183012333
OLEC01002887
425638
Bacteroidota
CTG
Gln
>WENV183012334
OLEC01002934
23696
Bacteroidota
GCT
Ser
>WENV183012231
OLEC01000481
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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