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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183013166
OLEF01000312
196621
Bacillota
GTC
Asp
>WENV183013215
OLEF01001154
309417
Bacillota
GGC
Ala
>WENV183013091
OLEF01000042
144612
Bacillota
TCT
Arg
>WENV183013190
OLEF01000508
235098
Bacillota
GAC
Val
>WENV183013210
OLEF01001045
235098
Bacillota
GAC
Val
>WENV183013199
OLEF01000650
44854
Bacillota
TGA
Ser
>WENV183013141
OLEF01000209
304022
Bacillota
GCC
Gly
>WENV183013151
OLEF01000248
304022
Bacillota
GCC
Gly
>WENV183013393
OLEF01016204
340802
Bacillota
TTG
Gln
>WENV183013344
OLEF01010467
429429
Bacillota
CCA
Trp
>WENV183013412
OLEF01020218
313454
Bacillota
GAA
Phe
>WENV183013282
OLEF01004180
41154
Bacillota
TAA
Leu
>WENV183013239
OLEF01001758
11034
Bacillota
GGA
Ser
>WENV183013150
OLEF01000248
235079
Bacillota
GAA
Phe
>WENV183013346
OLEF01010469
316443
Bacillota
GTC
Asp
>WENV183013153
OLEF01000264
338149
Bacillota
CTC
Glu
>WENV183013198
OLEF01000632
245298
Bacillota
CGG
Pro
>WENV183013355
OLEF01011607
37269
Bacillota
TGA
Ser
>WENV183013411
OLEF01020218
169968
Bacillota
CAT
Met
>WENV183013396
OLEF01016536
162445
Bacillota
CAT
Met
>WENV183013385
OLEF01015254
152492
Bacillota
GGG
Pro
>WENV183013392
OLEF01016204
144610
Bacillota
GTG
His
>WENV183013218
OLEF01001367
411547
Bacillota
CTG
Gln
>WENV183013400
OLEF01018056
147684
Bacillota
ACG
Arg
>WENV183013200
OLEF01000650
4624
Bacillota
GCT
Ser
>WENV183013293
OLEF01004794
412387
Bacillota
GCA
Cys
>WENV183013348
OLEF01010469
109476
Bacillota
TAG
Leu
>WENV183013167
OLEF01000312
235095
Bacillota
GGT
Thr
>WENV183013172
OLEF01000336
411549
Bacillota
TTG
Gln
>WENV183013196
OLEF01000591
148188
Bacillota
CCG
Arg
>WENV183013413
OLEF01020218
235127
Bacillota
TTT
Lys
>WENV183013223
OLEF01001501
235124
Bacillota
TGG
Pro
>WENV183013134
OLEF01000142
338129
Bacillota
TGT
Thr
>WENV183013149
OLEF01000247
144583
Bacillota
ACG
Arg
>WENV183013304
OLEF01006078
144652
Bacillota
GTC
Asp
>WENV183013165
OLEF01000312
235171
Bacillota
CCA
Trp
>WENV183013204
OLEF01000661
144621
Bacillota
GTT
Asn
>WENV183013113
OLEF01000085
58712
Bacillota
CAG
Leu
>WENV183013157
OLEF01000287
58712
Bacillota
CAG
Leu
>WENV183013176
OLEF01000357
245296
Bacillota
CCC
Gly
>WENV183013154
OLEF01000264
272992
Bacillota
CTT
Lys
>WENV183013391
OLEF01016204
157635
Bacillota
TCT
Arg
>WENV183013180
OLEF01000374
144594
Bacillota
CAC
Val
>WENV183013193
OLEF01000544
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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