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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183015321
OLEO01000045
235097
Bacteroidota
TTT
Lys
>WENV183015325
OLEO01000050
235097
Bacteroidota
TTT
Lys
>WENV183015365
OLEO01000447
235102
Bacteroidota
CGT
Thr
>WENV183015389
OLEO01000965
338155
Bacteroidota
CTC
Glu
>WENV183015468
OLEO01010857
58715
Bacteroidota
GAG
Leu
>WENV183015434
OLEO01004604
338486
Bacteroidota
CAT
Met
>WENV183015330
OLEO01000061
48053
Bacteroidota
TGA
Ser
>WENV183015359
OLEO01000270
48053
Bacteroidota
TGA
Ser
>WENV183015362
OLEO01000318
415410
Bacteroidota
TTG
Gln
>WENV183015345
OLEO01000113
338124
Bacteroidota
CCG
Arg
>WENV183015339
OLEO01000096
338132
Bacteroidota
GCA
Cys
>WENV183015454
OLEO01009457
58714
Bacteroidota
CAA
Leu
>WENV183015331
OLEO01000061
144656
Bacteroidota
GTG
His
>WENV183015323
OLEO01000046
235207
Bacteroidota
CAT
Met
>WENV183015400
OLEO01001311
144596
Bacteroidota
GGC
Ala
>WENV183015312
OLEO01000015
80607
Bacteroidota
GTA
Tyr
>WENV183015418
OLEO01002354
80614
Bacteroidota
>WENV183015350
OLEO01000150
419272
Bacteroidota
CTG
Gln
>WENV183015372
OLEO01000555
144655
Bacteroidota
GGC
Ala
>WENV183015452
OLEO01009207
338164
Bacteroidota
TTC
Glu
>WENV183015430
OLEO01003264
95875
Bacteroidota
TAG
Leu
>WENV183015433
OLEO01004420
240012
Bacteroidota
CCC
Gly
>WENV183015347
OLEO01000139
132360
Bacteroidota
GGG
Pro
>WENV183015388
OLEO01000965
23696
Bacteroidota
GCT
Ser
>WENV183015310
OLEO01000013
16224
Bacteroidota
GGA
Ser
>WENV183015357
OLEO01000231
16220
Bacteroidota
GGA
Ser
>WENV183015308
OLEO01000009
338125
Bacteroidota
CCT
Arg
>WENV183015406
OLEO01001470
338125
Bacteroidota
CCT
Arg
>WENV183015474
OLEO01015471
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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