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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183016020
OLER01000308
196621
Bacillota
GTC
Asp
>WENV183016040
OLER01000723
309417
Bacillota
GGC
Ala
>WENV183016093
OLER01003274
144612
Bacillota
TCT
Arg
>WENV183016213
OLER01017458
154063
Bacillota
CGG
Pro
>WENV183016001
OLER01000041
235098
Bacillota
GAC
Val
>WENV183016169
OLER01009711
338152
Bacillota
TTC
Glu
>WENV183016181
OLER01011797
148239
Bacillota
TCT
Arg
>WENV183016026
OLER01000347
44854
Bacillota
TGA
Ser
>WENV183016097
OLER01003314
304022
Bacillota
GCC
Gly
>WENV183016179
OLER01011776
246023
Bacillota
TGC
Ala
>WENV183016053
OLER01001063
59312
Bacillota
CAG
Leu
>WENV183016175
OLER01010965
338147
Bacillota
CTC
Glu
>WENV183016106
OLER01003895
235294
Bacillota
TGC
Ala
>WENV183016214
OLER01017458
338143
Bacillota
CTC
Glu
>WENV183016236
OLER01022380
429429
Bacillota
CCA
Trp
>WENV183016139
OLER01006434
11034
Bacillota
GGA
Ser
>WENV183016096
OLER01003314
235079
Bacillota
GAA
Phe
>WENV183016173
OLER01010738
37269
Bacillota
TGA
Ser
>WENV183016062
OLER01001333
155089
Bacillota
CAT
Met
>WENV183016178
OLER01011776
201704
Bacillota
GAT
Ile
>WENV183016080
OLER01002700
100326
Bacillota
GTA
Tyr
>WENV183016182
OLER01011797
144610
Bacillota
GTG
His
>WENV183016027
OLER01000347
4624
Bacillota
GCT
Ser
>WENV183016174
OLER01010738
10680
Bacillota
GGA
Ser
>WENV183016021
OLER01000308
235095
Bacillota
GGT
Thr
>WENV183016224
OLER01020342
239832
Bacillota
TGT
Thr
>WENV183016107
OLER01003988
411549
Bacillota
TTG
Gln
>WENV183016029
OLER01000386
148188
Bacillota
CCG
Arg
>WENV183016070
OLER01001975
256380
Bacillota
>WENV183016234
OLER01022126
235127
Bacillota
TTT
Lys
>WENV183016054
OLER01001064
235124
Bacillota
TGG
Pro
>WENV183016041
OLER01000728
338129
Bacillota
TGT
Thr
>WENV183016128
OLER01005315
144652
Bacillota
GTC
Asp
>WENV183016019
OLER01000308
235171
Bacillota
CCA
Trp
>WENV183016148
OLER01007982
245296
Bacillota
CCC
Gly
>WENV183016036
OLER01000586
144594
Bacillota
CAC
Val
>WENV183016047
OLER01000931
414486
Bacillota
CCC
Gly
>WENV183016065
OLER01001470
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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