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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183019097
OLFB01000350
235098
Bacillota
GAC
Val
>WENV183019225
OLFB01003115
23769
Bacillota
TAA
Leu
>WENV183019129
OLFB01000632
44854
Bacillota
TGA
Ser
>WENV183019211
OLFB01002558
44854
Bacillota
TGA
Ser
>WENV183019079
OLFB01000227
37071
Bacillota
TGA
Ser
>WENV183019279
OLFB01008720
246023
Bacillota
TGC
Ala
>WENV183018947
OLFB01000001
59312
Bacillota
CAG
Leu
>WENV183018948
OLFB01000001
59312
Bacillota
CAG
Leu
>WENV183019027
OLFB01000056
59312
Bacillota
CAG
Leu
>WENV183019050
OLFB01000091
59312
Bacillota
CAG
Leu
>WENV183019064
OLFB01000151
338147
Bacillota
CTC
Glu
>WENV183019078
OLFB01000220
338147
Bacillota
CTC
Glu
>WENV183019034
OLFB01000066
338147
Bacillota
CTC
Glu
>WENV183019002
OLFB01000026
340802
Bacillota
TTG
Gln
>WENV183019021
OLFB01000041
235114
Bacillota
TTT
Lys
>WENV183019096
OLFB01000334
235114
Bacillota
TTT
Lys
>WENV183019317
OLFB01012014
341763
Bacillota
CTC
Glu
>WENV183019163
OLFB01001037
235091
Bacillota
CTT
Lys
>WENV183019026
OLFB01000056
44859
Bacillota
AAG
Leu
>WENV183019104
OLFB01000388
11034
Bacillota
GGA
Ser
>WENV183019105
OLFB01000388
11034
Bacillota
GGA
Ser
>WENV183019122
OLFB01000496
11034
Bacillota
GGA
Ser
>WENV183019086
OLFB01000294
235117
Bacillota
TAC
Val
>WENV183019001
OLFB01000026
156937
Bacillota
GTG
His
>WENV183019140
OLFB01000818
338149
Bacillota
CTC
Glu
>WENV183019151
OLFB01000934
245298
Bacillota
CGG
Pro
>WENV183019161
OLFB01001023
245298
Bacillota
CGG
Pro
>WENV183018978
OLFB01000009
37269
Bacillota
TGA
Ser
>WENV183019012
OLFB01000032
152492
Bacillota
GGG
Pro
>WENV183019184
OLFB01001689
152492
Bacillota
GGG
Pro
>WENV183019019
OLFB01000041
144610
Bacillota
GTG
His
>WENV183018996
OLFB01000019
411547
Bacillota
CTG
Gln
>WENV183019150
OLFB01000934
411547
Bacillota
CTG
Gln
>WENV183019160
OLFB01001023
411547
Bacillota
CTG
Gln
>WENV183019207
OLFB01002512
411547
Bacillota
CTG
Gln
>WENV183018982
OLFB01000011
147684
Bacillota
ACG
Arg
>WENV183019130
OLFB01000636
147684
Bacillota
ACG
Arg
>WENV183019248
OLFB01004963
412387
Bacillota
GCA
Cys
>WENV183019098
OLFB01000360
235095
Bacillota
GGT
Thr
>WENV183019099
OLFB01000360
235095
Bacillota
GGT
Thr
>WENV183019101
OLFB01000360
235095
Bacillota
GGT
Thr
>WENV183019110
OLFB01000406
235095
Bacillota
GGT
Thr
>WENV183018958
OLFB01000004
344183
Bacillota
CTG
Gln
>WENV183019000
OLFB01000026
152151
Bacillota
TCT
Arg
>WENV183019306
OLFB01011674
37193
Bacillota
TAA
Leu
>WENV183019088
OLFB01000301
411549
Bacillota
TTG
Gln
>WENV183019169
OLFB01001217
411549
Bacillota
TTG
Gln
>WENV183019059
OLFB01000135
235142
Bacillota
CTT
Lys
>WENV183019171
OLFB01001299
148188
Bacillota
CCG
Arg
>WENV183019209
OLFB01002520
80612
Bacillota
GTA
Tyr
>WENV183019193
OLFB01001966
235127
Bacillota
TTT
Lys
>WENV183019013
OLFB01000035
235124
Bacillota
TGG
Pro
>WENV183019051
OLFB01000095
338129
Bacillota
TGT
Thr
>WENV183019056
OLFB01000116
144583
Bacillota
ACG
Arg
>WENV183019030
OLFB01000066
144652
Bacillota
GTC
Asp
>WENV183019108
OLFB01000406
235171
Bacillota
CCA
Trp
>WENV183019111
OLFB01000406
235171
Bacillota
CCA
Trp
>WENV183019046
OLFB01000084
144621
Bacillota
GTT
Asn
>WENV183019082
OLFB01000252
144621
Bacillota
GTT
Asn
>WENV183019141
OLFB01000818
144621
Bacillota
GTT
Asn
>WENV183019095
OLFB01000334
235113
Bacillota
GAA
Phe
>WENV183019038
OLFB01000069
58712
Bacillota
CAG
Leu
>WENV183019208
OLFB01002520
58712
Bacillota
CAG
Leu
>WENV183019054
OLFB01000104
245296
Bacillota
CCC
Gly
>WENV183019018
OLFB01000041
157635
Bacillota
TCT
Arg
>WENV183019042
OLFB01000075
144594
Bacillota
CAC
Val
>WENV183019033
OLFB01000066
95563
Bacillota
GTA
Tyr
>WENV183019117
OLFB01000447
238945
Bacillota
GCC
Gly
>WENV183019085
OLFB01000294
249259
Bacillota
GCC
Gly
>WENV183019081
OLFB01000236
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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