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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183020765
OLFG01000886
196621
Bacillota
GTC
Asp
>WENV183020721
OLFG01000337
144612
Bacillota
TCT
Arg
>WENV183020852
OLFG01004390
144612
Bacillota
TCT
Arg
>WENV183020742
OLFG01000481
235098
Bacillota
GAC
Val
>WENV183020788
OLFG01001486
235098
Bacillota
GAC
Val
>WENV183020892
OLFG01007171
148239
Bacillota
TCT
Arg
>WENV183020743
OLFG01000559
44854
Bacillota
TGA
Ser
>WENV183020786
OLFG01001282
37071
Bacillota
TGA
Ser
>WENV183020733
OLFG01000386
304022
Bacillota
GCC
Gly
>WENV183020944
OLFG01016387
338147
Bacillota
CTC
Glu
>WENV183020897
OLFG01007538
235150
Bacillota
TGC
Ala
>WENV183020884
OLFG01006852
144668
Bacillota
GTC
Asp
>WENV183020753
OLFG01000658
429429
Bacillota
CCA
Trp
>WENV183020885
OLFG01006852
41154
Bacillota
TAA
Leu
>WENV183020781
OLFG01001197
44859
Bacillota
AAG
Leu
>WENV183020747
OLFG01000579
11034
Bacillota
GGA
Ser
>WENV183020732
OLFG01000386
235079
Bacillota
GAA
Phe
>WENV183020762
OLFG01000885
338149
Bacillota
CTC
Glu
>WENV183020794
OLFG01001598
245298
Bacillota
CGG
Pro
>WENV183020862
OLFG01005180
287000
Bacillota
GTT
Asn
>WENV183020935
OLFG01014936
152492
Bacillota
GGG
Pro
>WENV183020893
OLFG01007171
144610
Bacillota
GTG
His
>WENV183020793
OLFG01001598
411547
Bacillota
CTG
Gln
>WENV183020744
OLFG01000559
4624
Bacillota
GCT
Ser
>WENV183020755
OLFG01000726
235095
Bacillota
GGT
Thr
>WENV183020766
OLFG01000886
235095
Bacillota
GGT
Thr
>WENV183020717
OLFG01000291
411549
Bacillota
TTG
Gln
>WENV183020769
OLFG01000948
235142
Bacillota
CTT
Lys
>WENV183020653
OLFG01000019
245386
Bacillota
CCA
Trp
>WENV183020868
OLFG01005456
148188
Bacillota
CCG
Arg
>WENV183020777
OLFG01001169
256380
Bacillota
>WENV183020727
OLFG01000357
235124
Bacillota
TGG
Pro
>WENV183020770
OLFG01000980
338129
Bacillota
TGT
Thr
>WENV183020690
OLFG01000149
144583
Bacillota
ACG
Arg
>WENV183020650
OLFG01000013
247734
Bacillota
TGC
Ala
>WENV183020823
OLFG01002880
238974
Bacillota
GAA
Phe
>WENV183020763
OLFG01000885
144621
Bacillota
GTT
Asn
>WENV183020771
OLFG01000991
235113
Bacillota
GAA
Phe
>WENV183020821
OLFG01002850
58712
Bacillota
CAG
Leu
>WENV183020789
OLFG01001511
245296
Bacillota
CCC
Gly
>WENV183020886
OLFG01006909
272992
Bacillota
CTT
Lys
>WENV183020768
OLFG01000943
144594
Bacillota
CAC
Val
>WENV183020837
OLFG01003227
95563
Bacillota
GTA
Tyr
>WENV183020761
OLFG01000883
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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