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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183025678
OLFT01047517
178679
Bacillota
CAT
Met
>WENV183024711
OLFT01000881
16842
Bacillota
CGA
Ser
>WENV183024263
OLFT01000128
158247
Bacillota
>WENV183025366
OLFT01010205
155113
Bacillota
CGG
Pro
>WENV183024507
OLFT01000425
154063
Bacillota
CGG
Pro
>WENV183024673
OLFT01000770
154063
Bacillota
CGG
Pro
>WENV183024927
OLFT01001990
154063
Bacillota
CGG
Pro
>WENV183024338
OLFT01000179
267649
Bacillota
TAC
Val
>WENV183024813
OLFT01001388
246392
Bacillota
GTT
Asn
>WENV183024731
OLFT01000931
339890
Bacillota
TTG
Gln
>WENV183025667
OLFT01044113
44854
Bacillota
TGA
Ser
>WENV183024994
OLFT01002648
37549
Bacillota
TAA
Leu
>WENV183024417
OLFT01000288
429443
Bacillota
GCA
Cys
>WENV183025598
OLFT01029076
246023
Bacillota
TGC
Ala
>WENV183024419
OLFT01000290
59312
Bacillota
CAG
Leu
>WENV183024496
OLFT01000397
59312
Bacillota
CAG
Leu
>WENV183025363
OLFT01010196
59312
Bacillota
CAG
Leu
>WENV183024802
OLFT01001312
238910
Bacillota
CTT
Lys
>WENV183025103
OLFT01004177
243119
Bacillota
CTT
Lys
>WENV183024983
OLFT01002571
338147
Bacillota
CTC
Glu
>WENV183024881
OLFT01001771
152047
Bacillota
GGG
Pro
>WENV183025615
OLFT01031887
235137
Bacillota
TGC
Ala
>WENV183025609
OLFT01031287
340802
Bacillota
TTG
Gln
>WENV183024815
OLFT01001388
241761
Bacillota
TAC
Val
>WENV183024502
OLFT01000408
429429
Bacillota
CCA
Trp
>WENV183024946
OLFT01002208
16834
Bacillota
GCT
Ser
>WENV183025104
OLFT01004195
16834
Bacillota
GCT
Ser
>WENV183025608
OLFT01031287
156937
Bacillota
GTG
His
>WENV183024787
OLFT01001237
114002
Bacillota
CAA
Leu
>WENV183025118
OLFT01004484
114002
Bacillota
CAA
Leu
>WENV183025111
OLFT01004384
342736
Bacillota
TTG
Gln
>WENV183024691
OLFT01000793
37437
Bacillota
TAA
Leu
>WENV183024743
OLFT01000951
37437
Bacillota
TAA
Leu
>WENV183025430
OLFT01013541
296878
Bacillota
GTT
Asn
>WENV183025432
OLFT01013541
243612
Bacillota
TAC
Val
>WENV183024135
OLFT01000043
271471
Bacillota
GCC
Gly
>WENV183024240
OLFT01000103
155089
Bacillota
CAT
Met
>WENV183024473
OLFT01000373
287000
Bacillota
GTT
Asn
>WENV183025065
OLFT01003593
37551
Bacillota
CGA
Ser
>WENV183025442
OLFT01014166
413152
Bacillota
TCC
Gly
>WENV183024765
OLFT01001056
152149
Bacillota
GTG
His
>WENV183025597
OLFT01029076
201704
Bacillota
GAT
Ile
>WENV183024595
OLFT01000612
152492
Bacillota
GGG
Pro
>WENV183025024
OLFT01002889
147135
Bacillota
ACG
Arg
>WENV183025648
OLFT01037722
153911
Bacillota
GAT
Ile
>WENV183025716
OLFT01063681
148268
Bacillota
CGG
Pro
>WENV183024274
OLFT01000142
100326
Bacillota
GTA
Tyr
>WENV183024442
OLFT01000311
100326
Bacillota
GTA
Tyr
>WENV183025682
OLFT01047517
242848
Bacillota
GAA
Phe
>WENV183024942
OLFT01002143
147684
Bacillota
ACG
Arg
>WENV183025011
OLFT01002787
147684
Bacillota
ACG
Arg
>WENV183024132
OLFT01000043
263765
Bacillota
TAC
Val
>WENV183024538
OLFT01000499
342895
Bacillota
CAT
Met
>WENV183025000
OLFT01002679
342895
Bacillota
CAT
Met
>WENV183025189
OLFT01005310
342895
Bacillota
CAT
Met
>WENV183025185
OLFT01005264
412387
Bacillota
GCA
Cys
>WENV183024993
OLFT01002648
419945
Bacillota
GCA
Cys
>WENV183024688
OLFT01000793
250349
Bacillota
GAA
Phe
>WENV183024759
OLFT01001032
235701
Bacillota
TTT
Lys
>WENV183024805
OLFT01001312
245386
Bacillota
CCA
Trp
>WENV183024451
OLFT01000330
59296
Bacillota
AAG
Leu
>WENV183025654
OLFT01038817
152046
Bacillota
TCT
Arg
>WENV183025341
OLFT01009278
298639
Bacillota
GTT
Asn
>WENV183024646
OLFT01000736
256380
Bacillota
>WENV183024653
OLFT01000746
256380
Bacillota
>WENV183024770
OLFT01001088
256380
Bacillota
>WENV183024732
OLFT01000931
235127
Bacillota
TTT
Lys
>WENV183024687
OLFT01000793
235197
Bacillota
GTC
Asp
>WENV183024739
OLFT01000951
235197
Bacillota
GTC
Asp
>WENV183024689
OLFT01000793
368876
Bacillota
GCC
Gly
>WENV183024741
OLFT01000951
368876
Bacillota
GCC
Gly
>WENV183024729
OLFT01000931
147674
Bacillota
TCT
Arg
>WENV183025281
OLFT01007480
298620
Bacillota
CAT
Met
>WENV183025078
OLFT01003795
241432
Bacillota
TGT
Thr
>WENV183025192
OLFT01005389
241432
Bacillota
TGT
Thr
>WENV183024757
OLFT01001032
243613
Bacillota
GTG
His
>WENV183025501
OLFT01019202
144583
Bacillota
ACG
Arg
>WENV183024444
OLFT01000311
238974
Bacillota
GAA
Phe
>WENV183024839
OLFT01001516
238974
Bacillota
GAA
Phe
>WENV183024949
OLFT01002226
238974
Bacillota
GAA
Phe
>WENV183025108
OLFT01004347
235113
Bacillota
GAA
Phe
>WENV183025543
OLFT01023619
256920
Bacillota
TTT
Lys
>WENV183025698
OLFT01052537
245296
Bacillota
CCC
Gly
>WENV183025629
OLFT01033859
198135
Bacillota
GAT
Ile
>WENV183025644
OLFT01037015
198135
Bacillota
GAT
Ile
>WENV183025425
OLFT01013471
299139
Bacillota
TGC
Ala
>WENV183025643
OLFT01037015
299139
Bacillota
TGC
Ala
>WENV183025384
OLFT01011041
144594
Bacillota
CAC
Val
>WENV183024244
OLFT01000108
414486
Bacillota
CCC
Gly
>WENV183024705
OLFT01000851
414486
Bacillota
CCC
Gly
>WENV183024438
OLFT01000309
272488
Bacillota
GAA
Phe
>WENV183025300
OLFT01008134
114075
Bacillota
TAG
Leu
>WENV183024992
OLFT01002648
384950
Bacillota
GCC
Gly
>WENV183024758
OLFT01001032
343027
Bacillota
TTG
Gln
>WENV183025571
OLFT01025687
338131
Bacillota
GCC
Gly
>WENV183024590
OLFT01000607
338128
Bacillota
TTC
Glu
>WENV183024998
OLFT01002677
338128
Bacillota
TTC
Glu
>WENV183025556
OLFT01024836
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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