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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183037446
OLGA01024898
235146
Actinomycetota
CGT
Thr
>WENV183037176
OLGA01010089
235153
Actinomycetota
CCT
Arg
>WENV183037539
OLGA01034550
37070
Actinomycetota
CGA
Ser
>WENV183037372
OLGA01019822
235194
Actinomycetota
GTG
His
>WENV183037717
OLGA01060651
245301
Actinomycetota
GCC
Gly
>WENV183037599
OLGA01041614
144826
Actinomycetota
GGG
Pro
>WENV183037145
OLGA01008979
23370
Actinomycetota
GCT
Ser
>WENV183037362
OLGA01019096
235174
Actinomycetota
TGC
Ala
>WENV183037571
OLGA01036981
356045
Actinomycetota
GAC
Val
>WENV183037781
OLGA01077544
153948
Actinomycetota
GGG
Pro
>WENV183037165
OLGA01009702
44855
Actinomycetota
TGA
Ser
>WENV183037128
OLGA01008450
313386
Actinomycetota
CGT
Thr
>WENV183037290
OLGA01015437
198659
Actinomycetota
TAC
Val
>WENV183037066
OLGA01007069
254857
Actinomycetota
CCG
Arg
>WENV183037308
OLGA01016422
144593
Actinomycetota
TAT
Ile
>WENV183037247
OLGA01013041
295695
Actinomycetota
CTC
Glu
>WENV183037248
OLGA01013041
338148
Actinomycetota
CTG
Gln
>WENV183037581
OLGA01038721
144825
Actinomycetota
CAT
Met
>WENV183037748
OLGA01068116
338139
Actinomycetota
GTT
Asn
>WENV183037620
OLGA01044481
235348
Actinomycetota
CCT
Arg
>WENV183037129
OLGA01008450
113601
Actinomycetota
TAG
Leu
>WENV183037478
OLGA01026666
144595
Actinomycetota
CAA
Leu
>WENV183037350
OLGA01018656
393408
Actinomycetota
TTC
Glu
>WENV183037292
OLGA01015535
47164
Actinomycetota
GGA
Ser
>WENV183037554
OLGA01035622
238470
Actinomycetota
GTT
Asn
>WENV183037555
OLGA01035622
238470
Actinomycetota
GTT
Asn
>WENV183037538
OLGA01034466
44851
Actinomycetota
TGA
Ser
>WENV183037531
OLGA01032846
411675
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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