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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183036244
OLGA01000372
95987
Bacteroidota
CAA
Leu
>WENV183036444
OLGA01001105
95987
Bacteroidota
CAA
Leu
>WENV183036525
OLGA01001559
95987
Bacteroidota
CAA
Leu
>WENV183036584
OLGA01001881
95987
Bacteroidota
CAA
Leu
>WENV183036106
OLGA01000162
141635
Bacteroidota
TAC
Val
>WENV183037845
OLGA01097954
339412
Bacteroidota
GGT
Thr
>WENV183037305
OLGA01016243
235102
Bacteroidota
CGT
Thr
>WENV183036013
OLGA01000059
267954
Bacteroidota
GCC
Gly
>WENV183036041
OLGA01000085
267954
Bacteroidota
GCC
Gly
>WENV183036098
OLGA01000154
237796
Bacteroidota
CGT
Thr
>WENV183036284
OLGA01000503
243025
Bacteroidota
CAT
Met
>WENV183037214
OLGA01011306
338155
Bacteroidota
CTC
Glu
>WENV183037553
OLGA01035463
46165
Bacteroidota
TGA
Ser
>WENV183037733
OLGA01065438
338486
Bacteroidota
CAT
Met
>WENV183036197
OLGA01000281
394247
Bacteroidota
CTC
Glu
>WENV183036655
OLGA01002254
136244
Bacteroidota
TAC
Val
>WENV183037414
OLGA01022244
237797
Bacteroidota
CCA
Trp
>WENV183037672
OLGA01051690
436206
Bacteroidota
TTG
Gln
>WENV183037270
OLGA01014169
20893
Bacteroidota
GGA
Ser
>WENV183036720
OLGA01002757
144695
Bacteroidota
CAT
Met
>WENV183037489
OLGA01027952
412479
Bacteroidota
TTG
Gln
>WENV183036228
OLGA01000336
147147
Bacteroidota
GTG
His
>WENV183036250
OLGA01000388
147147
Bacteroidota
GTG
His
>WENV183036349
OLGA01000711
147147
Bacteroidota
GTG
His
>WENV183036925
OLGA01004658
344692
Bacteroidota
GGT
Thr
>WENV183036014
OLGA01000059
145504
Bacteroidota
TGT
Thr
>WENV183036266
OLGA01000456
235203
Bacteroidota
TTT
Lys
>WENV183037044
OLGA01006639
338132
Bacteroidota
GCA
Cys
>WENV183036101
OLGA01000156
193809
Bacteroidota
CAT
Met
>WENV183036365
OLGA01000764
37076
Bacteroidota
TAA
Leu
>WENV183036566
OLGA01001800
37076
Bacteroidota
TAA
Leu
>WENV183036982
OLGA01005443
37076
Bacteroidota
TAA
Leu
>WENV183036690
OLGA01002485
144933
Bacteroidota
TCT
Arg
>WENV183036790
OLGA01003395
141414
Bacteroidota
GGG
Pro
>WENV183036875
OLGA01004045
251266
Bacteroidota
CTT
Lys
>WENV183036563
OLGA01001764
136207
Bacteroidota
TAC
Val
>WENV183037618
OLGA01044316
235207
Bacteroidota
CAT
Met
>WENV183036572
OLGA01001820
144596
Bacteroidota
GGC
Ala
>WENV183036911
OLGA01004396
80607
Bacteroidota
GTA
Tyr
>WENV183036798
OLGA01003448
16999
Bacteroidota
GGA
Ser
>WENV183036107
OLGA01000165
154643
Bacteroidota
CAT
Met
>WENV183037724
OLGA01062309
154643
Bacteroidota
CAT
Met
>WENV183036357
OLGA01000732
415558
Bacteroidota
TTG
Gln
>WENV183037504
OLGA01029870
144655
Bacteroidota
GGC
Ala
>WENV183035910
OLGA01000008
263771
Bacteroidota
CTT
Lys
>WENV183037745
OLGA01067119
338164
Bacteroidota
TTC
Glu
>WENV183037564
OLGA01035908
240012
Bacteroidota
CCC
Gly
>WENV183036657
OLGA01002260
150485
Bacteroidota
GTT
Asn
>WENV183037133
OLGA01008603
338165
Bacteroidota
GGT
Thr
>WENV183036511
OLGA01001499
196394
Bacteroidota
GTC
Asp
>WENV183036564
OLGA01001771
425638
Bacteroidota
CTG
Gln
>WENV183036003
OLGA01000049
353927
Bacteroidota
TTC
Glu
>WENV183036074
OLGA01000117
353927
Bacteroidota
TTC
Glu
>WENV183036382
OLGA01000827
353927
Bacteroidota
TTC
Glu
>WENV183036752
OLGA01002967
353927
Bacteroidota
TTC
Glu
>WENV183037366
OLGA01019457
146530
Bacteroidota
TGT
Thr
>WENV183036297
OLGA01000535
146762
Bacteroidota
TGG
Pro
>WENV183037213
OLGA01011306
23696
Bacteroidota
GCT
Ser
>WENV183036007
OLGA01000052
412236
Bacteroidota
CCC
Gly
>WENV183036342
OLGA01000689
414426
Bacteroidota
CTG
Gln
>WENV183036567
OLGA01001804
56823
Bacteroidota
TGA
Ser
>WENV183036606
OLGA01001997
56823
Bacteroidota
TGA
Ser
>WENV183037046
OLGA01006692
56823
Bacteroidota
TGA
Ser
>WENV183037291
OLGA01015459
56823
Bacteroidota
TGA
Ser
>WENV183036594
OLGA01001936
151960
Bacteroidota
GGC
Ala
>WENV183036403
OLGA01000904
338125
Bacteroidota
CCT
Arg
>WENV183037458
OLGA01025604
235129
Bacteroidota
GCC
Gly
>WENV183036069
OLGA01000116
313363
Bacteroidota
GAA
Phe
>WENV183036294
OLGA01000533
313363
Bacteroidota
GAA
Phe
>WENV183036597
OLGA01001960
313363
Bacteroidota
GAA
Phe
>WENV183036849
OLGA01003778
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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