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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183044966
OLGE01004047
95987
Bacteroidota
CAA
Leu
>WENV183045605
OLGE01016952
95987
Bacteroidota
CAA
Leu
>WENV183044027
OLGE01000257
141635
Bacteroidota
TAC
Val
>WENV183044651
OLGE01001815
141635
Bacteroidota
TAC
Val
>WENV183044785
OLGE01002519
339412
Bacteroidota
GGT
Thr
>WENV183045339
OLGE01009215
339412
Bacteroidota
GGT
Thr
>WENV183044886
OLGE01003239
235102
Bacteroidota
CGT
Thr
>WENV183043676
OLGE01000006
267954
Bacteroidota
GCC
Gly
>WENV183043950
OLGE01000190
237796
Bacteroidota
CGT
Thr
>WENV183044800
OLGE01002635
237796
Bacteroidota
CGT
Thr
>WENV183044426
OLGE01001054
126966
Bacteroidota
TAC
Val
>WENV183044755
OLGE01002415
97336
Bacteroidota
CAG
Leu
>WENV183045205
OLGE01006711
97336
Bacteroidota
CAG
Leu
>WENV183044753
OLGE01002406
126965
Bacteroidota
GGG
Pro
>WENV183046225
OLGE01099315
58715
Bacteroidota
GAG
Leu
>WENV183045761
OLGE01023330
338486
Bacteroidota
CAT
Met
>WENV183044311
OLGE01000740
394247
Bacteroidota
CTC
Glu
>WENV183044385
OLGE01000922
413663
Bacteroidota
CTG
Gln
>WENV183044565
OLGE01001486
413663
Bacteroidota
CTG
Gln
>WENV183044566
OLGE01001486
413663
Bacteroidota
CTG
Gln
>WENV183046071
OLGE01059072
237797
Bacteroidota
CCA
Trp
>WENV183044295
OLGE01000702
436206
Bacteroidota
TTG
Gln
>WENV183045992
OLGE01048645
20893
Bacteroidota
GGA
Ser
>WENV183044075
OLGE01000315
412479
Bacteroidota
TTG
Gln
>WENV183044449
OLGE01001120
412479
Bacteroidota
TTG
Gln
>WENV183044010
OLGE01000237
147147
Bacteroidota
GTG
His
>WENV183044204
OLGE01000491
147147
Bacteroidota
GTG
His
>WENV183044205
OLGE01000491
147147
Bacteroidota
GTG
His
>WENV183044430
OLGE01001063
147147
Bacteroidota
GTG
His
>WENV183044858
OLGE01002963
155123
Bacteroidota
GTT
Asn
>WENV183044367
OLGE01000880
155123
Bacteroidota
GTT
Asn
>WENV183044684
OLGE01001983
155123
Bacteroidota
GTT
Asn
>WENV183044857
OLGE01002963
155123
Bacteroidota
GTT
Asn
>WENV183045207
OLGE01006717
344692
Bacteroidota
GGT
Thr
>WENV183043677
OLGE01000006
145504
Bacteroidota
TGT
Thr
>WENV183045056
OLGE01004722
353373
Bacteroidota
>WENV183044500
OLGE01001295
168744
Bacteroidota
GTG
His
>WENV183045383
OLGE01009998
126641
Bacteroidota
TAC
Val
>WENV183045580
OLGE01015591
338132
Bacteroidota
GCA
Cys
>WENV183044558
OLGE01001460
193809
Bacteroidota
CAT
Met
>WENV183045923
OLGE01039317
46489
Bacteroidota
TGA
Ser
>WENV183044077
OLGE01000315
37076
Bacteroidota
TAA
Leu
>WENV183044580
OLGE01001524
37076
Bacteroidota
TAA
Leu
>WENV183044594
OLGE01001590
37076
Bacteroidota
TAA
Leu
>WENV183045773
OLGE01024627
171336
Bacteroidota
GGC
Ala
>WENV183044288
OLGE01000683
235207
Bacteroidota
CAT
Met
>WENV183043953
OLGE01000192
143169
Bacteroidota
GGG
Pro
>WENV183046295
OLGE01133620
144659
Bacteroidota
GTG
His
>WENV183045696
OLGE01020967
80607
Bacteroidota
GTA
Tyr
>WENV183044868
OLGE01003047
412235
Bacteroidota
>WENV183045299
OLGE01008691
147148
Bacteroidota
CAT
Met
>WENV183044328
OLGE01000773
415558
Bacteroidota
TTG
Gln
>WENV183044168
OLGE01000432
144590
Bacteroidota
GTT
Asn
>WENV183044033
OLGE01000274
419272
Bacteroidota
CTG
Gln
>WENV183045182
OLGE01006379
144655
Bacteroidota
GGC
Ala
>WENV183043982
OLGE01000230
263771
Bacteroidota
CTT
Lys
>WENV183046150
OLGE01078502
338164
Bacteroidota
TTC
Glu
>WENV183046031
OLGE01054113
95875
Bacteroidota
TAG
Leu
>WENV183043902
OLGE01000135
44852
Bacteroidota
TAA
Leu
>WENV183046244
OLGE01108509
150485
Bacteroidota
GTT
Asn
>WENV183044487
OLGE01001251
95986
Bacteroidota
GTA
Tyr
>WENV183044784
OLGE01002519
95986
Bacteroidota
GTA
Tyr
>WENV183045106
OLGE01005279
196394
Bacteroidota
GTC
Asp
>WENV183045107
OLGE01005279
196394
Bacteroidota
GTC
Asp
>WENV183045108
OLGE01005279
196394
Bacteroidota
GTC
Asp
>WENV183045164
OLGE01005977
196394
Bacteroidota
GTC
Asp
>WENV183045165
OLGE01005977
196394
Bacteroidota
GTC
Asp
>WENV183044469
OLGE01001183
94703
Bacteroidota
GTA
Tyr
>WENV183044587
OLGE01001567
94703
Bacteroidota
GTA
Tyr
>WENV183044041
OLGE01000299
353927
Bacteroidota
TTC
Glu
>WENV183044042
OLGE01000299
353927
Bacteroidota
TTC
Glu
>WENV183044921
OLGE01003610
146764
Bacteroidota
GTC
Asp
>WENV183045114
OLGE01005317
59498
Bacteroidota
GAG
Leu
>WENV183044911
OLGE01003477
151960
Bacteroidota
GGC
Ala
>WENV183043827
OLGE01000079
302002
Bacteroidota
CGT
Thr
>WENV183045779
OLGE01025015
16220
Bacteroidota
GGA
Ser
>WENV183044032
OLGE01000272
127023
Bacteroidota
GGG
Pro
>WENV183043972
OLGE01000215
313363
Bacteroidota
GAA
Phe
>WENV183044072
OLGE01000311
313363
Bacteroidota
GAA
Phe
>WENV183044094
OLGE01000329
313363
Bacteroidota
GAA
Phe
>WENV183044237
OLGE01000553
313363
Bacteroidota
GAA
Phe
>WENV183044263
OLGE01000613
313363
Bacteroidota
GAA
Phe
>WENV183044518
OLGE01001375
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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