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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183057562
OLHL01009940
238010
Alphaproteobacteria
TTT
Lys
>WENV183057385
OLHL01001101
267922
Alphaproteobacteria
CCA
Trp
>WENV183057471
OLHL01003044
241021
Alphaproteobacteria
GGC
Ala
>WENV183057434
OLHL01002183
113700
Alphaproteobacteria
>WENV183057445
OLHL01002323
113700
Alphaproteobacteria
>WENV183057555
OLHL01008349
23671
Alphaproteobacteria
CGA
Ser
>WENV183057501
OLHL01004390
339723
Alphaproteobacteria
>WENV183057469
OLHL01002999
339722
Alphaproteobacteria
TTG
Gln
>WENV183057454
OLHL01002430
80918
Alphaproteobacteria
GAG
Leu
>WENV183057508
OLHL01004724
80918
Alphaproteobacteria
GAG
Leu
>WENV183057435
OLHL01002186
147334
Alphaproteobacteria
CAT
Met
>WENV183057526
OLHL01005456
157999
Alphaproteobacteria
TCT
Arg
>WENV183057351
OLHL01000528
281594
Alphaproteobacteria
TGT
Thr
>WENV183057337
OLHL01000439
113716
Alphaproteobacteria
CAA
Leu
>WENV183057424
OLHL01001933
412279
Alphaproteobacteria
CCC
Gly
>WENV183057313
OLHL01000330
28682
Alphaproteobacteria
GGA
Ser
>WENV183057339
OLHL01000472
23672
Alphaproteobacteria
GCT
Ser
>WENV183057503
OLHL01004481
23672
Alphaproteobacteria
GCT
Ser
>WENV183057476
OLHL01003255
412477
Alphaproteobacteria
GCA
Cys
>WENV183057470
OLHL01003025
147283
Alphaproteobacteria
GTG
His
>WENV183057455
OLHL01002443
338288
Alphaproteobacteria
TTC
Glu
>WENV183057510
OLHL01004980
338288
Alphaproteobacteria
TTC
Glu
>WENV183057525
OLHL01005435
338288
Alphaproteobacteria
TTC
Glu
>WENV183057587
OLHL01013117
340294
Alphaproteobacteria
GGT
Thr
>WENV183057617
OLHL01021108
349650
Alphaproteobacteria
CAC
Val
>WENV183057413
OLHL01001615
113715
Alphaproteobacteria
TAG
Leu
>WENV183057364
OLHL01000773
127020
Alphaproteobacteria
TCT
Arg
>WENV183057416
OLHL01001644
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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