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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183061956
OLIC01002020
119661
Verrucomicrobiota
CAA
Leu
>WENV183061914
OLIC01000672
155256
Verrucomicrobiota
TCT
Arg
>WENV183061963
OLIC01002250
246701
Verrucomicrobiota
TTT
Lys
>WENV183062026
OLIC01012777
345141
Verrucomicrobiota
TTG
Gln
>WENV183061996
OLIC01004885
345133
Verrucomicrobiota
GAC
Val
>WENV183061938
OLIC01001594
82054
Verrucomicrobiota
GTA
Tyr
>WENV183061937
OLIC01001582
344844
Verrucomicrobiota
GCA
Cys
>WENV183061975
OLIC01003017
128202
Verrucomicrobiota
GTC
Asp
>WENV183062000
OLIC01005122
46246
Verrucomicrobiota
TGA
Ser
>WENV183061974
OLIC01002999
97755
Verrucomicrobiota
TAG
Leu
>WENV183061933
OLIC01001370
246700
Verrucomicrobiota
TTC
Glu
>WENV183061954
OLIC01001937
246700
Verrucomicrobiota
TTC
Glu
>WENV183061920
OLIC01000799
246687
Verrucomicrobiota
CGC
Ala
>WENV183061968
OLIC01002389
344841
Verrucomicrobiota
CAC
Val
>WENV183061936
OLIC01001554
405704
Verrucomicrobiota
GCC
Gly
>WENV183061977
OLIC01003054
60880
Verrucomicrobiota
CAG
Leu
>WENV183062016
OLIC01009706
344842
Verrucomicrobiota
CGT
Thr
>WENV183061932
OLIC01001332
170105
Verrucomicrobiota
CAT
Met
>WENV183062010
OLIC01006413
287733
Verrucomicrobiota
CCA
Trp
>WENV183061967
OLIC01002312
345123
Verrucomicrobiota
TGT
Thr
>WENV183061921
OLIC01000852
345110
Verrucomicrobiota
CCT
Arg
>WENV183061926
OLIC01001052
7274
Verrucomicrobiota
CGA
Ser
>WENV183061917
OLIC01000704
155268
Verrucomicrobiota
CGG
Pro
>WENV183061962
OLIC01002161
246728
Verrucomicrobiota
GAA
Phe
>WENV183061966
OLIC01002285
7256
Verrucomicrobiota
GCT
Ser
>WENV183061985
OLIC01003768
345119
Verrucomicrobiota
TAC
Val
>WENV183061923
OLIC01000860
345124
Verrucomicrobiota
GTT
Asn
>WENV183061964
OLIC01002277
246709
Verrucomicrobiota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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