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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183063302
OLIF01016963
235146
Actinomycetota
CGT
Thr
>WENV183063163
OLIF01005120
235347
Actinomycetota
GGC
Ala
>WENV183063164
OLIF01005120
235347
Actinomycetota
GGC
Ala
>WENV183063405
OLIF01039418
166493
Actinomycetota
CTT
Lys
>WENV183063254
OLIF01010648
235153
Actinomycetota
CCT
Arg
>WENV183063366
OLIF01029143
16400
Actinomycetota
GAG
Leu
>WENV183063189
OLIF01006018
37070
Actinomycetota
CGA
Ser
>WENV183063023
OLIF01000459
201717
Actinomycetota
CTT
Lys
>WENV183063270
OLIF01012396
144600
Actinomycetota
TGG
Pro
>WENV183063097
OLIF01001762
235194
Actinomycetota
GTG
His
>WENV183063025
OLIF01000481
158720
Actinomycetota
ACG
Arg
>WENV183063026
OLIF01000481
158720
Actinomycetota
ACG
Arg
>WENV183063121
OLIF01002712
245301
Actinomycetota
GCC
Gly
>WENV183063022
OLIF01000455
411601
Actinomycetota
CCC
Gly
>WENV183063053
OLIF01000977
144826
Actinomycetota
GGG
Pro
>WENV183063024
OLIF01000477
23370
Actinomycetota
GCT
Ser
>WENV183062974
OLIF01000149
174149
Actinomycetota
GAT
Ile
>WENV183063374
OLIF01032398
338239
Actinomycetota
TTC
Glu
>WENV183063018
OLIF01000444
338239
Actinomycetota
TTC
Glu
>WENV183062975
OLIF01000149
235174
Actinomycetota
TGC
Ala
>WENV183062992
OLIF01000278
121510
Actinomycetota
TAA
Leu
>WENV183062993
OLIF01000299
356045
Actinomycetota
GAC
Val
>WENV183063072
OLIF01001146
356045
Actinomycetota
GAC
Val
>WENV183062978
OLIF01000159
44855
Actinomycetota
TGA
Ser
>WENV183062994
OLIF01000299
235199
Actinomycetota
CAC
Val
>WENV183063073
OLIF01001146
235199
Actinomycetota
CAC
Val
>WENV183063016
OLIF01000435
44862
Actinomycetota
CGA
Ser
>WENV183063136
OLIF01003363
313386
Actinomycetota
CGT
Thr
>WENV183063021
OLIF01000450
413665
Actinomycetota
TTG
Gln
>WENV183063186
OLIF01005743
413665
Actinomycetota
TTG
Gln
>WENV183062988
OLIF01000255
254857
Actinomycetota
CCG
Arg
>WENV183063160
OLIF01004761
144700
Actinomycetota
CAT
Met
>WENV183063203
OLIF01006792
144636
Actinomycetota
GAT
Ile
>WENV183063205
OLIF01006792
144636
Actinomycetota
GAT
Ile
>WENV183063036
OLIF01000692
295695
Actinomycetota
CTC
Glu
>WENV183063037
OLIF01000692
338148
Actinomycetota
CTG
Gln
>WENV183063011
OLIF01000414
53078
Actinomycetota
GGA
Ser
>WENV183063418
OLIF01041148
237792
Actinomycetota
CCT
Arg
>WENV183063295
OLIF01015942
113702
Actinomycetota
TAA
Leu
>WENV183062984
OLIF01000195
235348
Actinomycetota
CCT
Arg
>WENV183063149
OLIF01004142
237794
Actinomycetota
CCG
Arg
>WENV183063224
OLIF01008279
411554
Actinomycetota
CCC
Gly
>WENV183063137
OLIF01003363
113601
Actinomycetota
TAG
Leu
>WENV183063003
OLIF01000361
144595
Actinomycetota
CAA
Leu
>WENV183063338
OLIF01024159
414234
Actinomycetota
CTG
Gln
>WENV183063101
OLIF01001970
145269
Actinomycetota
CAT
Met
>WENV183063217
OLIF01007572
119485
Actinomycetota
TAA
Leu
>WENV183062986
OLIF01000209
80622
Actinomycetota
CAG
Leu
>WENV183063386
OLIF01036268
163948
Actinomycetota
CAT
Met
>WENV183063201
OLIF01006753
235173
Actinomycetota
GGC
Ala
>WENV183063052
OLIF01000952
243162
Actinomycetota
GTT
Asn
>WENV183063131
OLIF01002904
243162
Actinomycetota
GTT
Asn
>WENV183063039
OLIF01000725
144660
Actinomycetota
TAC
Val
>WENV183063335
OLIF01023204
278447
Actinomycetota
GTG
His
>WENV183063200
OLIF01006753
267574
Actinomycetota
CAC
Val
>WENV183063159
OLIF01004761
95593
Actinomycetota
>WENV183063001
OLIF01000316
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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