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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183063960
OLIH01000302
144657
Bacteroidota
CGG
Pro
>WENV183063930
OLIH01000261
243025
Bacteroidota
CAT
Met
>WENV183063688
OLIH01000056
339341
Bacteroidota
GGT
Thr
>WENV183063980
OLIH01000332
343138
Bacteroidota
CCT
Arg
>WENV183063611
OLIH01000030
58715
Bacteroidota
GAG
Leu
>WENV183063622
OLIH01000037
46165
Bacteroidota
TGA
Ser
>WENV183063540
OLIH01000007
338486
Bacteroidota
CAT
Met
>WENV183063867
OLIH01000161
338486
Bacteroidota
CAT
Met
>WENV183063610
OLIH01000030
59689
Bacteroidota
CAG
Leu
>WENV183063726
OLIH01000090
59689
Bacteroidota
CAG
Leu
>WENV183063623
OLIH01000037
20893
Bacteroidota
GGA
Ser
>WENV183063729
OLIH01000090
20893
Bacteroidota
GGA
Ser
>WENV183063545
OLIH01000009
235203
Bacteroidota
TTT
Lys
>WENV183063583
OLIH01000017
235203
Bacteroidota
TTT
Lys
>WENV183063624
OLIH01000037
238121
Bacteroidota
CTT
Lys
>WENV183063625
OLIH01000037
238121
Bacteroidota
CTT
Lys
>WENV183063988
OLIH01000339
338132
Bacteroidota
GCA
Cys
>WENV183063626
OLIH01000037
45423
Bacteroidota
TGA
Ser
>WENV183063704
OLIH01000067
58714
Bacteroidota
CAA
Leu
>WENV183063537
OLIH01000007
144659
Bacteroidota
GTG
His
>WENV183063538
OLIH01000007
144659
Bacteroidota
GTG
His
>WENV183063961
OLIH01000302
235180
Bacteroidota
CCA
Trp
>WENV183063535
OLIH01000007
80614
Bacteroidota
>WENV183063582
OLIH01000017
80614
Bacteroidota
>WENV183063687
OLIH01000056
80614
Bacteroidota
>WENV183063981
OLIH01000332
338164
Bacteroidota
TTC
Glu
>WENV183063982
OLIH01000332
338164
Bacteroidota
TTC
Glu
>WENV183063705
OLIH01000067
95875
Bacteroidota
TAG
Leu
>WENV183063616
OLIH01000035
139743
Bacteroidota
GGG
Pro
>WENV183064042
OLIH01000555
240012
Bacteroidota
CCC
Gly
>WENV183063716
OLIH01000080
147439
Bacteroidota
TCT
Arg
>WENV183063778
OLIH01000122
411550
Bacteroidota
CTG
Gln
>WENV183063779
OLIH01000122
411550
Bacteroidota
CTG
Gln
>WENV183063560
OLIH01000014
185921
Bacteroidota
GTC
Asp
>WENV183063561
OLIH01000014
185921
Bacteroidota
GTC
Asp
>WENV183064012
OLIH01000416
23696
Bacteroidota
GCT
Ser
>WENV183063959
OLIH01000301
151960
Bacteroidota
GGC
Ala
>WENV183063609
OLIH01000030
235129
Bacteroidota
GCC
Gly
>WENV183063935
OLIH01000269
235129
Bacteroidota
GCC
Gly
>WENV183063937
OLIH01000269
235129
Bacteroidota
GCC
Gly
>WENV183063831
OLIH01000150
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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