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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183089761
OLJW01015606
119475
Actinomycetota
TAA
Leu
>WENV183089231
OLJW01003237
144589
Actinomycetota
ACG
Arg
>WENV183090146
OLJW01071707
16400
Actinomycetota
GAG
Leu
>WENV183090157
OLJW01074546
123202
Actinomycetota
ACG
Arg
>WENV183089585
OLJW01008126
37070
Actinomycetota
CGA
Ser
>WENV183089753
OLJW01014754
201717
Actinomycetota
CTT
Lys
>WENV183089976
OLJW01033379
245301
Actinomycetota
GCC
Gly
>WENV183089680
OLJW01011673
144826
Actinomycetota
GGG
Pro
>WENV183089157
OLJW01002501
16219
Actinomycetota
GCT
Ser
>WENV183089601
OLJW01008522
235174
Actinomycetota
TGC
Ala
>WENV183088914
OLJW01001088
235101
Actinomycetota
TTT
Lys
>WENV183089626
OLJW01009151
235101
Actinomycetota
TTT
Lys
>WENV183089590
OLJW01008228
144625
Actinomycetota
GTC
Asp
>WENV183089958
OLJW01030052
145423
Actinomycetota
TCT
Arg
>WENV183090163
OLJW01078047
44855
Actinomycetota
TGA
Ser
>WENV183089496
OLJW01006356
145345
Actinomycetota
TAC
Val
>WENV183089417
OLJW01005153
198659
Actinomycetota
TAC
Val
>WENV183089483
OLJW01006059
16223
Actinomycetota
GAG
Leu
>WENV183089029
OLJW01001624
144593
Actinomycetota
TAT
Ile
>WENV183089989
OLJW01035825
113703
Actinomycetota
TAG
Leu
>WENV183089654
OLJW01010077
44942
Actinomycetota
TGA
Ser
>WENV183089922
OLJW01026218
45147
Actinomycetota
CGA
Ser
>WENV183089267
OLJW01003463
98279
Actinomycetota
GTA
Tyr
>WENV183089055
OLJW01001754
338148
Actinomycetota
CTG
Gln
>WENV183089588
OLJW01008214
235148
Actinomycetota
GTT
Asn
>WENV183089810
OLJW01018328
235148
Actinomycetota
GTT
Asn
>WENV183089968
OLJW01032403
237792
Actinomycetota
CCT
Arg
>WENV183090081
OLJW01052304
113702
Actinomycetota
TAA
Leu
>WENV183089316
OLJW01003983
176456
Actinomycetota
TCT
Arg
>WENV183089502
OLJW01006447
145347
Actinomycetota
CAA
Leu
>WENV183090050
OLJW01045790
37521
Actinomycetota
GCT
Ser
>WENV183089962
OLJW01031523
237794
Actinomycetota
CCG
Arg
>WENV183090184
OLJW01084768
411554
Actinomycetota
CCC
Gly
>WENV183089280
OLJW01003535
113601
Actinomycetota
TAG
Leu
>WENV183089875
OLJW01022559
144595
Actinomycetota
CAA
Leu
>WENV183089526
OLJW01006923
145343
Actinomycetota
GGG
Pro
>WENV183089910
OLJW01025527
145343
Actinomycetota
GGG
Pro
>WENV183088929
OLJW01001159
235149
Actinomycetota
CCT
Arg
>WENV183089861
OLJW01021714
235149
Actinomycetota
CCT
Arg
>WENV183090007
OLJW01038258
51286
Actinomycetota
TGA
Ser
>WENV183090131
OLJW01065983
145269
Actinomycetota
CAT
Met
>WENV183089279
OLJW01003535
235121
Actinomycetota
CGT
Thr
>WENV183088944
OLJW01001206
47164
Actinomycetota
GGA
Ser
>WENV183088743
OLJW01000576
144635
Actinomycetota
TGG
Pro
>WENV183089003
OLJW01001435
80622
Actinomycetota
CAG
Leu
>WENV183089345
OLJW01004370
80622
Actinomycetota
CAG
Leu
>WENV183089735
OLJW01014266
44851
Actinomycetota
TGA
Ser
>WENV183089192
OLJW01002808
235173
Actinomycetota
GGC
Ala
>WENV183089508
OLJW01006627
235173
Actinomycetota
GGC
Ala
>WENV183089775
OLJW01016193
235173
Actinomycetota
GGC
Ala
>WENV183089760
OLJW01015456
243162
Actinomycetota
GTT
Asn
>WENV183089453
OLJW01005681
278447
Actinomycetota
GTG
His
>WENV183089741
OLJW01014384
278447
Actinomycetota
GTG
His
>WENV183090136
OLJW01066984
95593
Actinomycetota
>WENV183090169
OLJW01079597
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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