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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183090856
OLKF01000187
196621
Bacillota
GTC
Asp
>WENV183090967
OLKF01004196
309417
Bacillota
GGC
Ala
>WENV183090868
OLKF01000250
144612
Bacillota
TCT
Arg
>WENV183090915
OLKF01001476
235098
Bacillota
GAC
Val
>WENV183091015
OLKF01008362
338152
Bacillota
TTC
Glu
>WENV183090905
OLKF01001070
44854
Bacillota
TGA
Ser
>WENV183090931
OLKF01002018
246023
Bacillota
TGC
Ala
>WENV183090956
OLKF01003262
59312
Bacillota
CAG
Leu
>WENV183090980
OLKF01005242
338147
Bacillota
CTC
Glu
>WENV183090990
OLKF01006127
235137
Bacillota
TGC
Ala
>WENV183090950
OLKF01002926
235294
Bacillota
TGC
Ala
>WENV183090898
OLKF01000788
293599
Bacillota
CTT
Lys
>WENV183090937
OLKF01002241
198770
Bacillota
GTC
Asp
>WENV183091042
OLKF01011029
429429
Bacillota
CCA
Trp
>WENV183091055
OLKF01012479
313454
Bacillota
GAA
Phe
>WENV183091058
OLKF01012480
41154
Bacillota
TAA
Leu
>WENV183090993
OLKF01006233
11034
Bacillota
GGA
Ser
>WENV183091068
OLKF01016288
243646
Bacillota
GTT
Asn
>WENV183090983
OLKF01005353
235079
Bacillota
GAA
Phe
>WENV183090929
OLKF01002018
235087
Bacillota
TGC
Ala
>WENV183091009
OLKF01008362
316443
Bacillota
GTC
Asp
>WENV183090881
OLKF01000588
338149
Bacillota
CTC
Glu
>WENV183090900
OLKF01000848
245298
Bacillota
CGG
Pro
>WENV183091024
OLKF01008698
37269
Bacillota
TGA
Ser
>WENV183091078
OLKF01017834
155089
Bacillota
CAT
Met
>WENV183091047
OLKF01011718
152492
Bacillota
GGG
Pro
>WENV183090897
OLKF01000763
100326
Bacillota
GTA
Tyr
>WENV183090923
OLKF01001895
100326
Bacillota
GTA
Tyr
>WENV183090998
OLKF01006984
144610
Bacillota
GTG
His
>WENV183090899
OLKF01000848
411547
Bacillota
CTG
Gln
>WENV183090978
OLKF01005114
411547
Bacillota
CTG
Gln
>WENV183091067
OLKF01015461
147684
Bacillota
ACG
Arg
>WENV183090906
OLKF01001070
4624
Bacillota
GCT
Ser
>WENV183090857
OLKF01000187
235095
Bacillota
GGT
Thr
>WENV183090955
OLKF01003259
411549
Bacillota
TTG
Gln
>WENV183090880
OLKF01000560
148188
Bacillota
CCG
Arg
>WENV183090945
OLKF01002704
235124
Bacillota
TGG
Pro
>WENV183090849
OLKF01000040
338129
Bacillota
TGT
Thr
>WENV183090853
OLKF01000158
144583
Bacillota
ACG
Arg
>WENV183091018
OLKF01008451
144672
Bacillota
TCT
Arg
>WENV183090855
OLKF01000187
235171
Bacillota
CCA
Trp
>WENV183090882
OLKF01000588
144621
Bacillota
GTT
Asn
>WENV183091072
OLKF01016288
235292
Bacillota
CCA
Trp
>WENV183090928
OLKF01001995
58712
Bacillota
CAG
Leu
>WENV183090910
OLKF01001225
245296
Bacillota
CCC
Gly
>WENV183091023
OLKF01008651
144594
Bacillota
CAC
Val
>WENV183091037
OLKF01010435
414486
Bacillota
CCC
Gly
>WENV183090994
OLKF01006363
114075
Bacillota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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