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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183109485
OLNN01007390
235097
Bacteroidota
TTT
Lys
>WENV183109572
OLNN01010389
235097
Bacteroidota
TTT
Lys
>WENV183109966
OLNN01042214
235102
Bacteroidota
CGT
Thr
>WENV183108301
OLNN01000038
267954
Bacteroidota
GCC
Gly
>WENV183109994
OLNN01049267
243025
Bacteroidota
CAT
Met
>WENV183109989
OLNN01048584
17323
Bacteroidota
GGA
Ser
>WENV183109835
OLNN01027544
338486
Bacteroidota
CAT
Met
>WENV183109473
OLNN01007003
415410
Bacteroidota
TTG
Gln
>WENV183108271
OLNN01000028
155123
Bacteroidota
GTT
Asn
>WENV183109857
OLNN01029025
338124
Bacteroidota
CCG
Arg
>WENV183109219
OLNN01002981
235203
Bacteroidota
TTT
Lys
>WENV183109701
OLNN01017005
235203
Bacteroidota
TTT
Lys
>WENV183109743
OLNN01019190
338132
Bacteroidota
GCA
Cys
>WENV183109924
OLNN01037767
144933
Bacteroidota
TCT
Arg
>WENV183109553
OLNN01009417
144656
Bacteroidota
GTG
His
>WENV183108953
OLNN01001430
235207
Bacteroidota
CAT
Met
>WENV183109842
OLNN01027854
80607
Bacteroidota
GTA
Tyr
>WENV183110029
OLNN01056479
80614
Bacteroidota
>WENV183109794
OLNN01023521
52358
Bacteroidota
TGA
Ser
>WENV183109665
OLNN01014600
154643
Bacteroidota
CAT
Met
>WENV183109785
OLNN01023056
419272
Bacteroidota
CTG
Gln
>WENV183110004
OLNN01052582
144655
Bacteroidota
GGC
Ala
>WENV183108325
OLNN01000053
144639
Bacteroidota
GGC
Ala
>WENV183109894
OLNN01033479
240012
Bacteroidota
CCC
Gly
>WENV183108762
OLNN01000749
132360
Bacteroidota
GGG
Pro
>WENV183108248
OLNN01000019
353927
Bacteroidota
TTC
Glu
>WENV183109951
OLNN01040517
353927
Bacteroidota
TTC
Glu
>WENV183109745
OLNN01019445
185921
Bacteroidota
GTC
Asp
>WENV183110046
OLNN01059716
414426
Bacteroidota
CTG
Gln
>WENV183109712
OLNN01017389
16220
Bacteroidota
GGA
Ser
>WENV183109901
OLNN01034498
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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