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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183110197
OLNO01000049
235097
Bacteroidota
TTT
Lys
>WENV183110215
OLNO01000059
235097
Bacteroidota
TTT
Lys
>WENV183110576
OLNO01000948
235102
Bacteroidota
CGT
Thr
>WENV183111318
OLNO01013637
235102
Bacteroidota
CGT
Thr
>WENV183110178
OLNO01000035
144657
Bacteroidota
CGG
Pro
>WENV183110770
OLNO01001970
144657
Bacteroidota
CGG
Pro
>WENV183110174
OLNO01000029
338155
Bacteroidota
CTC
Glu
>WENV183110468
OLNO01000549
338155
Bacteroidota
CTC
Glu
>WENV183111323
OLNO01013854
153993
Bacteroidota
GAT
Ile
>WENV183110453
OLNO01000516
343138
Bacteroidota
CCT
Arg
>WENV183111033
OLNO01005051
58715
Bacteroidota
GAG
Leu
>WENV183110572
OLNO01000934
46165
Bacteroidota
TGA
Ser
>WENV183110971
OLNO01004046
46165
Bacteroidota
TGA
Ser
>WENV183110231
OLNO01000084
338486
Bacteroidota
CAT
Met
>WENV183110232
OLNO01000084
338486
Bacteroidota
CAT
Met
>WENV183110525
OLNO01000719
338486
Bacteroidota
CAT
Met
>WENV183110808
OLNO01002254
338486
Bacteroidota
CAT
Met
>WENV183110139
OLNO01000007
415410
Bacteroidota
TTG
Gln
>WENV183110315
OLNO01000194
415410
Bacteroidota
TTG
Gln
>WENV183110555
OLNO01000866
415410
Bacteroidota
TTG
Gln
>WENV183110853
OLNO01002605
59689
Bacteroidota
CAG
Leu
>WENV183110630
OLNO01001252
237247
Bacteroidota
TTT
Lys
>WENV183111072
OLNO01006106
344692
Bacteroidota
GGT
Thr
>WENV183110125
OLNO01000001
145504
Bacteroidota
TGT
Thr
>WENV183111207
OLNO01009152
235182
Bacteroidota
>WENV183110538
OLNO01000768
341950
Bacteroidota
>WENV183111471
OLNO01023241
341950
Bacteroidota
>WENV183110209
OLNO01000052
338124
Bacteroidota
CCG
Arg
>WENV183110443
OLNO01000493
338124
Bacteroidota
CCG
Arg
>WENV183110247
OLNO01000099
235203
Bacteroidota
TTT
Lys
>WENV183110964
OLNO01003862
235203
Bacteroidota
TTT
Lys
>WENV183110391
OLNO01000332
238121
Bacteroidota
CTT
Lys
>WENV183110392
OLNO01000332
238121
Bacteroidota
CTT
Lys
>WENV183111837
OLNO01070988
126641
Bacteroidota
TAC
Val
>WENV183110243
OLNO01000093
338132
Bacteroidota
GCA
Cys
>WENV183110869
OLNO01002760
338132
Bacteroidota
GCA
Cys
>WENV183111056
OLNO01005541
338132
Bacteroidota
GCA
Cys
>WENV183111075
OLNO01006245
338132
Bacteroidota
GCA
Cys
>WENV183110970
OLNO01004044
144688
Bacteroidota
CAT
Met
>WENV183111617
OLNO01035995
58714
Bacteroidota
CAA
Leu
>WENV183110167
OLNO01000026
235165
Bacteroidota
CCA
Trp
>WENV183110212
OLNO01000056
144933
Bacteroidota
TCT
Arg
>WENV183110598
OLNO01001058
144933
Bacteroidota
TCT
Arg
>WENV183110266
OLNO01000135
144656
Bacteroidota
GTG
His
>WENV183110335
OLNO01000228
235207
Bacteroidota
CAT
Met
>WENV183110373
OLNO01000288
235207
Bacteroidota
CAT
Met
>WENV183111544
OLNO01028198
235207
Bacteroidota
CAT
Met
>WENV183110420
OLNO01000409
235180
Bacteroidota
CCA
Trp
>WENV183110519
OLNO01000694
144596
Bacteroidota
GGC
Ala
>WENV183110662
OLNO01001461
80607
Bacteroidota
GTA
Tyr
>WENV183110222
OLNO01000070
80614
Bacteroidota
>WENV183110651
OLNO01001416
80614
Bacteroidota
>WENV183110755
OLNO01001916
80614
Bacteroidota
>WENV183110324
OLNO01000206
52358
Bacteroidota
TGA
Ser
>WENV183110492
OLNO01000602
52358
Bacteroidota
TGA
Ser
>WENV183110646
OLNO01001369
52358
Bacteroidota
TGA
Ser
>WENV183110710
OLNO01001680
52358
Bacteroidota
TGA
Ser
>WENV183110960
OLNO01003842
52358
Bacteroidota
TGA
Ser
>WENV183111077
OLNO01006260
154643
Bacteroidota
CAT
Met
>WENV183110263
OLNO01000132
95559
Bacteroidota
TAG
Leu
>WENV183110439
OLNO01000484
419272
Bacteroidota
CTG
Gln
>WENV183110488
OLNO01000600
419272
Bacteroidota
CTG
Gln
>WENV183110279
OLNO01000142
144655
Bacteroidota
GGC
Ala
>WENV183110124
OLNO01000001
144639
Bacteroidota
GGC
Ala
>WENV183110376
OLNO01000294
338164
Bacteroidota
TTC
Glu
>WENV183110377
OLNO01000294
338164
Bacteroidota
TTC
Glu
>WENV183110250
OLNO01000103
95875
Bacteroidota
TAG
Leu
>WENV183110297
OLNO01000167
95875
Bacteroidota
TAG
Leu
>WENV183111157
OLNO01007918
338314
Bacteroidota
CCT
Arg
>WENV183110213
OLNO01000056
240012
Bacteroidota
CCC
Gly
>WENV183110523
OLNO01000708
44852
Bacteroidota
TAA
Leu
>WENV183110259
OLNO01000121
147439
Bacteroidota
TCT
Arg
>WENV183111151
OLNO01007730
280513
Bacteroidota
TTT
Lys
>WENV183110233
OLNO01000085
150485
Bacteroidota
GTT
Asn
>WENV183110234
OLNO01000085
150485
Bacteroidota
GTT
Asn
>WENV183110327
OLNO01000208
411550
Bacteroidota
CTG
Gln
>WENV183110253
OLNO01000116
132360
Bacteroidota
GGG
Pro
>WENV183110292
OLNO01000157
132360
Bacteroidota
GGG
Pro
>WENV183111085
OLNO01006446
132360
Bacteroidota
GGG
Pro
>WENV183110432
OLNO01000454
425638
Bacteroidota
CTG
Gln
>WENV183110489
OLNO01000600
19317
Bacteroidota
GGA
Ser
>WENV183110358
OLNO01000251
353927
Bacteroidota
TTC
Glu
>WENV183110537
OLNO01000768
353927
Bacteroidota
TTC
Glu
>WENV183111168
OLNO01008293
353927
Bacteroidota
TTC
Glu
>WENV183110220
OLNO01000070
185921
Bacteroidota
GTC
Asp
>WENV183111781
OLNO01059746
146530
Bacteroidota
TGT
Thr
>WENV183110173
OLNO01000029
23696
Bacteroidota
GCT
Ser
>WENV183110467
OLNO01000549
23696
Bacteroidota
GCT
Ser
>WENV183110882
OLNO01002853
23696
Bacteroidota
GCT
Ser
>WENV183110419
OLNO01000405
414426
Bacteroidota
CTG
Gln
>WENV183110493
OLNO01000604
16224
Bacteroidota
GGA
Ser
>WENV183110743
OLNO01001852
151960
Bacteroidota
GGC
Ala
>WENV183110440
OLNO01000484
16220
Bacteroidota
GGA
Ser
>WENV183111031
OLNO01005051
235129
Bacteroidota
GCC
Gly
>WENV183111137
OLNO01007386
235129
Bacteroidota
GCC
Gly
>WENV183111063
OLNO01005789
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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