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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
113 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183147890
OLON01004285
24650
Bacillota
TAA
Leu
>WENV183147978
OLON01006391
24650
Bacillota
TAA
Leu
>WENV183148204
OLON01019628
155958
Bacillota
GAT
Ile
>WENV183147792
OLON01002561
37213
Bacillota
TGA
Ser
>WENV183148148
OLON01014059
144612
Bacillota
TCT
Arg
>WENV183148169
OLON01015366
144612
Bacillota
TCT
Arg
>WENV183147455
OLON01000266
267556
Bacillota
TAC
Val
>WENV183147457
OLON01000266
267556
Bacillota
TAC
Val
>WENV183148276
OLON01025689
156189
Bacillota
GAT
Ile
>WENV183147410
OLON01000175
338152
Bacillota
TTC
Glu
>WENV183148172
OLON01015427
44854
Bacillota
TGA
Ser
>WENV183148200
OLON01019429
44854
Bacillota
TGA
Ser
>WENV183148311
OLON01035559
356488
Bacillota
TGT
Thr
>WENV183147553
OLON01000569
235154
Bacillota
GTT
Asn
>WENV183148397
OLON01062910
80951
Bacillota
CAG
Leu
>WENV183148080
OLON01009987
16787
Bacillota
TGA
Ser
>WENV183147454
OLON01000263
59312
Bacillota
CAG
Leu
>WENV183148202
OLON01019542
59312
Bacillota
CAG
Leu
>WENV183148176
OLON01015879
338147
Bacillota
CTC
Glu
>WENV183147359
OLON01000091
340802
Bacillota
TTG
Gln
>WENV183148217
OLON01019808
340802
Bacillota
TTG
Gln
>WENV183148043
OLON01008409
419288
Bacillota
GGT
Thr
>WENV183148081
OLON01009987
18548
Bacillota
GCT
Ser
>WENV183147390
OLON01000133
37083
Bacillota
TGA
Ser
>WENV183148147
OLON01014013
44859
Bacillota
AAG
Leu
>WENV183148243
OLON01022373
44859
Bacillota
AAG
Leu
>WENV183147930
OLON01005361
11034
Bacillota
GGA
Ser
>WENV183147335
OLON01000077
274189
Bacillota
TGT
Thr
>WENV183148040
OLON01008381
235079
Bacillota
GAA
Phe
>WENV183148334
OLON01041288
235087
Bacillota
TGC
Ala
>WENV183148012
OLON01007853
338149
Bacillota
CTC
Glu
>WENV183147910
OLON01004647
245298
Bacillota
CGG
Pro
>WENV183147987
OLON01006809
37269
Bacillota
TGA
Ser
>WENV183147769
OLON01002260
258936
Bacillota
GGT
Thr
>WENV183147714
OLON01001563
413152
Bacillota
TCC
Gly
>WENV183147662
OLON01001165
173810
Bacillota
CAT
Met
>WENV183147859
OLON01003626
28968
Bacillota
GGA
Ser
>WENV183147456
OLON01000266
162445
Bacillota
CAT
Met
>WENV183147458
OLON01000266
162445
Bacillota
CAT
Met
>WENV183147800
OLON01002671
162445
Bacillota
CAT
Met
>WENV183147802
OLON01002671
162445
Bacillota
CAT
Met
>WENV183147558
OLON01000581
152492
Bacillota
GGG
Pro
>WENV183147879
OLON01004018
152492
Bacillota
GGG
Pro
>WENV183147883
OLON01004118
152492
Bacillota
GGG
Pro
>WENV183148019
OLON01008026
152492
Bacillota
GGG
Pro
>WENV183148101
OLON01011176
152492
Bacillota
GGG
Pro
>WENV183148222
OLON01020116
411585
Bacillota
GCA
Cys
>WENV183148257
OLON01023775
144610
Bacillota
GTG
His
>WENV183148184
OLON01016534
353537
Bacillota
GTT
Asn
>WENV183147909
OLON01004647
411547
Bacillota
CTG
Gln
>WENV183147533
OLON01000445
147684
Bacillota
ACG
Arg
>WENV183147708
OLON01001498
147684
Bacillota
ACG
Arg
>WENV183147720
OLON01001608
147684
Bacillota
ACG
Arg
>WENV183147733
OLON01001763
147684
Bacillota
ACG
Arg
>WENV183147741
OLON01001953
147684
Bacillota
ACG
Arg
>WENV183147772
OLON01002328
147684
Bacillota
ACG
Arg
>WENV183147996
OLON01007119
147684
Bacillota
ACG
Arg
>WENV183148173
OLON01015427
4624
Bacillota
GCT
Ser
>WENV183147404
OLON01000166
412387
Bacillota
GCA
Cys
>WENV183147408
OLON01000175
412387
Bacillota
GCA
Cys
>WENV183147411
OLON01000175
412387
Bacillota
GCA
Cys
>WENV183147721
OLON01001628
411584
Bacillota
TCC
Gly
>WENV183147289
OLON01000050
18852
Bacillota
GCT
Ser
>WENV183148175
OLON01015558
235095
Bacillota
GGT
Thr
>WENV183148151
OLON01014234
185292
Bacillota
ACG
Arg
>WENV183147974
OLON01006352
235289
Bacillota
GTT
Asn
>WENV183147893
OLON01004379
411549
Bacillota
TTG
Gln
>WENV183148110
OLON01011419
235142
Bacillota
CTT
Lys
>WENV183147869
OLON01003826
59296
Bacillota
AAG
Leu
>WENV183148221
OLON01020116
144767
Bacillota
GTG
His
>WENV183148000
OLON01007298
148188
Bacillota
CCG
Arg
>WENV183148077
OLON01009783
148188
Bacillota
CCG
Arg
>WENV183148224
OLON01020116
235288
Bacillota
TAC
Val
>WENV183147932
OLON01005484
235638
Bacillota
GAA
Phe
>WENV183148323
OLON01037232
235124
Bacillota
TGG
Pro
>WENV183148166
OLON01015051
338129
Bacillota
TGT
Thr
>WENV183148366
OLON01049959
338129
Bacillota
TGT
Thr
>WENV183148361
OLON01048251
144583
Bacillota
ACG
Arg
>WENV183148209
OLON01019808
144672
Bacillota
TCT
Arg
>WENV183148215
OLON01019808
144672
Bacillota
TCT
Arg
>WENV183147292
OLON01000054
419877
Bacillota
TCC
Gly
>WENV183147329
OLON01000070
419877
Bacillota
TCC
Gly
>WENV183147356
OLON01000091
419877
Bacillota
TCC
Gly
>WENV183148372
OLON01051976
235171
Bacillota
CCA
Trp
>WENV183148013
OLON01007853
144621
Bacillota
GTT
Asn
>WENV183147820
OLON01003061
148495
Bacillota
TCT
Arg
>WENV183148275
OLON01025589
353527
Bacillota
TTC
Glu
>WENV183148349
OLON01044321
353527
Bacillota
TTC
Glu
>WENV183147866
OLON01003777
144762
Bacillota
TCT
Arg
>WENV183147858
OLON01003620
245296
Bacillota
CCC
Gly
>WENV183147357
OLON01000091
157635
Bacillota
TCT
Arg
>WENV183147426
OLON01000211
145468
Bacillota
ACG
Arg
>WENV183148024
OLON01008328
144594
Bacillota
CAC
Val
>WENV183147327
OLON01000068
272488
Bacillota
GAA
Phe
>WENV183147331
OLON01000070
272488
Bacillota
GAA
Phe
>WENV183147431
OLON01000212
272488
Bacillota
GAA
Phe
>WENV183147515
OLON01000398
272488
Bacillota
GAA
Phe
>WENV183147657
OLON01001128
272488
Bacillota
GAA
Phe
>WENV183147711
OLON01001521
272488
Bacillota
GAA
Phe
>WENV183147814
OLON01002918
272488
Bacillota
GAA
Phe
>WENV183147984
OLON01006595
272488
Bacillota
GAA
Phe
>WENV183148057
OLON01008865
272488
Bacillota
GAA
Phe
>WENV183148186
OLON01016717
272488
Bacillota
GAA
Phe
>WENV183147445
OLON01000231
119513
Bacillota
CAA
Leu
>WENV183148003
OLON01007422
238945
Bacillota
GCC
Gly
>WENV183147438
OLON01000214
238945
Bacillota
GCC
Gly
>WENV183147585
OLON01000677
238945
Bacillota
GCC
Gly
>WENV183147712
OLON01001521
238945
Bacillota
GCC
Gly
>WENV183147815
OLON01002918
238945
Bacillota
GCC
Gly
>WENV183147824
OLON01003079
238945
Bacillota
GCC
Gly
>WENV183147877
OLON01003988
238945
Bacillota
GCC
Gly
>WENV183148104
OLON01011236
273862
Bacillota
TGC
Ala
>WENV183147571
OLON01000616
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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