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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183157110
OLOT01000059
235146
Actinomycetota
CGT
Thr
>WENV183157519
OLOT01001414
235347
Actinomycetota
GGC
Ala
>WENV183157504
OLOT01001261
235153
Actinomycetota
CCT
Arg
>WENV183157070
OLOT01000032
144589
Actinomycetota
ACG
Arg
>WENV183157071
OLOT01000032
144589
Actinomycetota
ACG
Arg
>WENV183157310
OLOT01000401
201717
Actinomycetota
CTT
Lys
>WENV183157257
OLOT01000226
144600
Actinomycetota
TGG
Pro
>WENV183157899
OLOT01006689
235194
Actinomycetota
GTG
His
>WENV183157538
OLOT01001530
158720
Actinomycetota
ACG
Arg
>WENV183157235
OLOT01000172
305322
Actinomycetota
TGC
Ala
>WENV183157324
OLOT01000440
305322
Actinomycetota
TGC
Ala
>WENV183157617
OLOT01002225
245301
Actinomycetota
GCC
Gly
>WENV183157919
OLOT01007306
411601
Actinomycetota
CCC
Gly
>WENV183157423
OLOT01000765
144826
Actinomycetota
GGG
Pro
>WENV183157303
OLOT01000385
23370
Actinomycetota
GCT
Ser
>WENV183157323
OLOT01000440
174149
Actinomycetota
GAT
Ile
>WENV183157295
OLOT01000368
338239
Actinomycetota
TTC
Glu
>WENV183157060
OLOT01000022
235101
Actinomycetota
TTT
Lys
>WENV183157787
OLOT01004508
121510
Actinomycetota
TAA
Leu
>WENV183157032
OLOT01000007
145423
Actinomycetota
TCT
Arg
>WENV183157674
OLOT01002788
44855
Actinomycetota
TGA
Ser
>WENV183157758
OLOT01003920
235199
Actinomycetota
CAC
Val
>WENV183157650
OLOT01002472
44862
Actinomycetota
CGA
Ser
>WENV183157108
OLOT01000059
313386
Actinomycetota
CGT
Thr
>WENV183157058
OLOT01000021
198659
Actinomycetota
TAC
Val
>WENV183157518
OLOT01001414
413665
Actinomycetota
TTG
Gln
>WENV183157269
OLOT01000266
254857
Actinomycetota
CCG
Arg
>WENV183158127
OLOT01017042
254857
Actinomycetota
CCG
Arg
>WENV183157239
OLOT01000180
16223
Actinomycetota
GAG
Leu
>WENV183157302
OLOT01000385
144700
Actinomycetota
CAT
Met
>WENV183157028
OLOT01000007
44942
Actinomycetota
TGA
Ser
>WENV183157392
OLOT01000614
243671
Actinomycetota
CTC
Glu
>WENV183157174
OLOT01000106
98279
Actinomycetota
GTA
Tyr
>WENV183157322
OLOT01000433
338148
Actinomycetota
CTG
Gln
>WENV183157393
OLOT01000614
338148
Actinomycetota
CTG
Gln
>WENV183157159
OLOT01000092
235148
Actinomycetota
GTT
Asn
>WENV183157160
OLOT01000092
235148
Actinomycetota
GTT
Asn
>WENV183157230
OLOT01000168
235148
Actinomycetota
GTT
Asn
>WENV183157460
OLOT01001027
235148
Actinomycetota
GTT
Asn
>WENV183157416
OLOT01000741
144825
Actinomycetota
CAT
Met
>WENV183157067
OLOT01000031
145347
Actinomycetota
CAA
Leu
>WENV183157593
OLOT01002048
338139
Actinomycetota
GTT
Asn
>WENV183157918
OLOT01007292
235348
Actinomycetota
CCT
Arg
>WENV183157176
OLOT01000106
16467
Actinomycetota
GCT
Ser
>WENV183157205
OLOT01000134
411554
Actinomycetota
CCC
Gly
>WENV183157089
OLOT01000044
113601
Actinomycetota
TAG
Leu
>WENV183157109
OLOT01000059
113601
Actinomycetota
TAG
Leu
>WENV183157256
OLOT01000226
144595
Actinomycetota
CAA
Leu
>WENV183157169
OLOT01000103
145343
Actinomycetota
GGG
Pro
>WENV183157059
OLOT01000021
235149
Actinomycetota
CCT
Arg
>WENV183157825
OLOT01005634
414234
Actinomycetota
CTG
Gln
>WENV183157204
OLOT01000134
91808
Actinomycetota
CAG
Leu
>WENV183157031
OLOT01000007
145269
Actinomycetota
CAT
Met
>WENV183157088
OLOT01000044
235121
Actinomycetota
CGT
Thr
>WENV183157029
OLOT01000007
393408
Actinomycetota
TTC
Glu
>WENV183157068
OLOT01000031
144635
Actinomycetota
TGG
Pro
>WENV183157066
OLOT01000031
119485
Actinomycetota
TAA
Leu
>WENV183157490
OLOT01001184
80622
Actinomycetota
CAG
Leu
>WENV183157304
OLOT01000386
16222
Actinomycetota
GAG
Leu
>WENV183157161
OLOT01000092
235173
Actinomycetota
GGC
Ala
>WENV183157236
OLOT01000172
235173
Actinomycetota
GGC
Ala
>WENV183157725
OLOT01003473
243162
Actinomycetota
GTT
Asn
>WENV183157115
OLOT01000067
144660
Actinomycetota
TAC
Val
>WENV183157069
OLOT01000032
278447
Actinomycetota
GTG
His
>WENV183157301
OLOT01000385
95593
Actinomycetota
>WENV183157534
OLOT01001498
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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