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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183162335
OLOW01000094
235097
Bacteroidota
TTT
Lys
>WENV183163589
OLOW01017542
235102
Bacteroidota
CGT
Thr
>WENV183163743
OLOW01025658
146761
Bacteroidota
GAT
Ile
>WENV183164082
OLOW01070214
144657
Bacteroidota
CGG
Pro
>WENV183163250
OLOW01007530
243025
Bacteroidota
CAT
Met
>WENV183162480
OLOW01000422
338155
Bacteroidota
CTC
Glu
>WENV183163904
OLOW01042570
58715
Bacteroidota
GAG
Leu
>WENV183164121
OLOW01081496
17323
Bacteroidota
GGA
Ser
>WENV183163915
OLOW01043678
338486
Bacteroidota
CAT
Met
>WENV183164024
OLOW01057550
413663
Bacteroidota
CTG
Gln
>WENV183163701
OLOW01022823
415410
Bacteroidota
TTG
Gln
>WENV183163379
OLOW01010665
411543
Bacteroidota
CTG
Gln
>WENV183163670
OLOW01021297
237797
Bacteroidota
CCA
Trp
>WENV183163890
OLOW01040926
128251
Bacteroidota
TGG
Pro
>WENV183163550
OLOW01016267
344692
Bacteroidota
GGT
Thr
>WENV183163903
OLOW01042043
341950
Bacteroidota
>WENV183162550
OLOW01000732
338124
Bacteroidota
CCG
Arg
>WENV183162321
OLOW01000070
338132
Bacteroidota
GCA
Cys
>WENV183162915
OLOW01003072
338132
Bacteroidota
GCA
Cys
>WENV183163309
OLOW01008898
144933
Bacteroidota
TCT
Arg
>WENV183163834
OLOW01032899
144933
Bacteroidota
TCT
Arg
>WENV183162681
OLOW01001421
144656
Bacteroidota
GTG
His
>WENV183162602
OLOW01000954
235207
Bacteroidota
CAT
Met
>WENV183163048
OLOW01004461
144596
Bacteroidota
GGC
Ala
>WENV183163759
OLOW01026646
80607
Bacteroidota
GTA
Tyr
>WENV183163278
OLOW01008202
16999
Bacteroidota
GGA
Ser
>WENV183163292
OLOW01008534
80614
Bacteroidota
>WENV183162509
OLOW01000539
154643
Bacteroidota
CAT
Met
>WENV183162784
OLOW01002039
144590
Bacteroidota
GTT
Asn
>WENV183162739
OLOW01001780
95559
Bacteroidota
TAG
Leu
>WENV183162574
OLOW01000821
419272
Bacteroidota
CTG
Gln
>WENV183163442
OLOW01012693
144655
Bacteroidota
GGC
Ala
>WENV183163813
OLOW01030917
144639
Bacteroidota
GGC
Ala
>WENV183162691
OLOW01001482
44852
Bacteroidota
TAA
Leu
>WENV183164065
OLOW01066582
147439
Bacteroidota
TCT
Arg
>WENV183162702
OLOW01001497
50727
Bacteroidota
TGA
Ser
>WENV183163184
OLOW01006303
50727
Bacteroidota
TGA
Ser
>WENV183163614
OLOW01018347
132360
Bacteroidota
GGG
Pro
>WENV183163381
OLOW01010822
425638
Bacteroidota
CTG
Gln
>WENV183163281
OLOW01008281
353927
Bacteroidota
TTC
Glu
>WENV183162479
OLOW01000422
23696
Bacteroidota
GCT
Ser
>WENV183163124
OLOW01005697
414426
Bacteroidota
CTG
Gln
>WENV183163252
OLOW01007579
16220
Bacteroidota
GGA
Ser
>WENV183162408
OLOW01000266
338125
Bacteroidota
CCT
Arg
>WENV183163462
OLOW01013446
235129
Bacteroidota
GCC
Gly
>WENV183163986
OLOW01051869
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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