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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183173720
OLPE01000001
119661
Verrucomicrobiota
CAA
Leu
>WENV183173787
OLPE01000013
155256
Verrucomicrobiota
TCT
Arg
>WENV183173735
OLPE01000002
246701
Verrucomicrobiota
TTT
Lys
>WENV183173870
OLPE01000036
345141
Verrucomicrobiota
TTG
Gln
>WENV183173918
OLPE01000058
345133
Verrucomicrobiota
GAC
Val
>WENV183173733
OLPE01000002
82054
Verrucomicrobiota
GTA
Tyr
>WENV183174173
OLPE01000373
246677
Verrucomicrobiota
CTT
Lys
>WENV183174174
OLPE01000373
246677
Verrucomicrobiota
CTT
Lys
>WENV183173765
OLPE01000006
344844
Verrucomicrobiota
GCA
Cys
>WENV183173722
OLPE01000001
155264
Verrucomicrobiota
GGG
Pro
>WENV183173871
OLPE01000036
344845
Verrucomicrobiota
CTG
Gln
>WENV183173736
OLPE01000002
128202
Verrucomicrobiota
GTC
Asp
>WENV183173868
OLPE01000036
128202
Verrucomicrobiota
GTC
Asp
>WENV183173723
OLPE01000001
414625
Verrucomicrobiota
CCC
Gly
>WENV183173759
OLPE01000006
46246
Verrucomicrobiota
TGA
Ser
>WENV183173721
OLPE01000001
97755
Verrucomicrobiota
TAG
Leu
>WENV183173761
OLPE01000006
246700
Verrucomicrobiota
TTC
Glu
>WENV183173766
OLPE01000006
246700
Verrucomicrobiota
TTC
Glu
>WENV183173768
OLPE01000006
246687
Verrucomicrobiota
CGC
Ala
>WENV183173725
OLPE01000001
419909
Verrucomicrobiota
TCC
Gly
>WENV183173877
OLPE01000041
344841
Verrucomicrobiota
CAC
Val
>WENV183174106
OLPE01000263
60880
Verrucomicrobiota
CAG
Leu
>WENV183173729
OLPE01000001
82056
Verrucomicrobiota
TAA
Leu
>WENV183174172
OLPE01000373
344842
Verrucomicrobiota
CGT
Thr
>WENV183174086
OLPE01000221
170105
Verrucomicrobiota
CAT
Met
>WENV183173951
OLPE01000080
287733
Verrucomicrobiota
CCA
Trp
>WENV183173767
OLPE01000006
345123
Verrucomicrobiota
TGT
Thr
>WENV183173728
OLPE01000001
345110
Verrucomicrobiota
CCT
Arg
>WENV183173762
OLPE01000006
344839
Verrucomicrobiota
GTG
His
>WENV183174069
OLPE01000201
7274
Verrucomicrobiota
CGA
Ser
>WENV183173730
OLPE01000001
246260
Verrucomicrobiota
>WENV183174423
OLPE01001122
155268
Verrucomicrobiota
CGG
Pro
>WENV183173764
OLPE01000006
82181
Verrucomicrobiota
AAG
Leu
>WENV183173726
OLPE01000001
246728
Verrucomicrobiota
GAA
Phe
>WENV183173731
OLPE01000001
7256
Verrucomicrobiota
GCT
Ser
>WENV183173758
OLPE01000006
345115
Verrucomicrobiota
CAT
Met
>WENV183173917
OLPE01000058
345119
Verrucomicrobiota
TAC
Val
>WENV183173732
OLPE01000002
345124
Verrucomicrobiota
GTT
Asn
>WENV183173734
OLPE01000002
17023
Verrucomicrobiota
GGA
Ser
>WENV183173760
OLPE01000006
368497
Verrucomicrobiota
GCC
Gly
>WENV183173878
OLPE01000041
368497
Verrucomicrobiota
GCC
Gly
>WENV183173724
OLPE01000001
345142
Verrucomicrobiota
CCG
Arg
>WENV183173763
OLPE01000006
246709
Verrucomicrobiota
CAT
Met
>WENV183173727
OLPE01000001
154693
Verrucomicrobiota
TGG
Pro
>WENV183173950
OLPE01000080
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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