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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183178615
OLPH01000261
235097
Bacteroidota
TTT
Lys
>WENV183178832
OLPH01000595
235097
Bacteroidota
TTT
Lys
>WENV183178843
OLPH01000626
235097
Bacteroidota
TTT
Lys
>WENV183179517
OLPH01005502
235102
Bacteroidota
CGT
Thr
>WENV183180100
OLPH01058307
267954
Bacteroidota
GCC
Gly
>WENV183178402
OLPH01000068
144657
Bacteroidota
CGG
Pro
>WENV183178288
OLPH01000006
243025
Bacteroidota
CAT
Met
>WENV183178662
OLPH01000317
243025
Bacteroidota
CAT
Met
>WENV183178534
OLPH01000161
343138
Bacteroidota
CCT
Arg
>WENV183179074
OLPH01001298
58715
Bacteroidota
GAG
Leu
>WENV183178787
OLPH01000524
46165
Bacteroidota
TGA
Ser
>WENV183179324
OLPH01002798
46165
Bacteroidota
TGA
Ser
>WENV183180189
OLPH01091457
46165
Bacteroidota
TGA
Ser
>WENV183178630
OLPH01000281
17323
Bacteroidota
GGA
Ser
>WENV183178304
OLPH01000013
338486
Bacteroidota
CAT
Met
>WENV183179112
OLPH01001497
338486
Bacteroidota
CAT
Met
>WENV183179476
OLPH01004618
338486
Bacteroidota
CAT
Met
>WENV183179033
OLPH01001137
48053
Bacteroidota
TGA
Ser
>WENV183179149
OLPH01001650
48053
Bacteroidota
TGA
Ser
>WENV183178636
OLPH01000290
415410
Bacteroidota
TTG
Gln
>WENV183178999
OLPH01001029
415410
Bacteroidota
TTG
Gln
>WENV183178472
OLPH01000124
411543
Bacteroidota
CTG
Gln
>WENV183178400
OLPH01000068
59689
Bacteroidota
CAG
Leu
>WENV183178375
OLPH01000057
344692
Bacteroidota
GGT
Thr
>WENV183179322
OLPH01002798
344692
Bacteroidota
GGT
Thr
>WENV183178299
OLPH01000010
145504
Bacteroidota
TGT
Thr
>WENV183180169
OLPH01077461
235182
Bacteroidota
>WENV183178714
OLPH01000394
341950
Bacteroidota
>WENV183179737
OLPH01013480
272983
Bacteroidota
CGT
Thr
>WENV183178837
OLPH01000603
338124
Bacteroidota
CCG
Arg
>WENV183178850
OLPH01000651
338124
Bacteroidota
CCG
Arg
>WENV183178789
OLPH01000524
238121
Bacteroidota
CTT
Lys
>WENV183179560
OLPH01006470
126641
Bacteroidota
TAC
Val
>WENV183178604
OLPH01000248
338132
Bacteroidota
GCA
Cys
>WENV183178748
OLPH01000436
338132
Bacteroidota
GCA
Cys
>WENV183178991
OLPH01001014
338132
Bacteroidota
GCA
Cys
>WENV183179031
OLPH01001136
338132
Bacteroidota
GCA
Cys
>WENV183179143
OLPH01001641
338132
Bacteroidota
GCA
Cys
>WENV183179565
OLPH01006506
338132
Bacteroidota
GCA
Cys
>WENV183178788
OLPH01000524
58714
Bacteroidota
CAA
Leu
>WENV183178886
OLPH01000750
235165
Bacteroidota
CCA
Trp
>WENV183178546
OLPH01000179
144933
Bacteroidota
TCT
Arg
>WENV183179151
OLPH01001655
144656
Bacteroidota
GTG
His
>WENV183178755
OLPH01000449
235207
Bacteroidota
CAT
Met
>WENV183178403
OLPH01000068
235180
Bacteroidota
CCA
Trp
>WENV183178973
OLPH01000972
144596
Bacteroidota
GGC
Ala
>WENV183178920
OLPH01000829
80607
Bacteroidota
GTA
Tyr
>WENV183178609
OLPH01000255
80614
Bacteroidota
>WENV183180166
OLPH01076328
154643
Bacteroidota
CAT
Met
>WENV183179717
OLPH01012219
175704
Bacteroidota
TGC
Ala
>WENV183178794
OLPH01000535
144590
Bacteroidota
GTT
Asn
>WENV183178821
OLPH01000579
95559
Bacteroidota
TAG
Leu
>WENV183179467
OLPH01004490
419272
Bacteroidota
CTG
Gln
>WENV183178635
OLPH01000287
144655
Bacteroidota
GGC
Ala
>WENV183178457
OLPH01000108
144639
Bacteroidota
GGC
Ala
>WENV183178533
OLPH01000161
338164
Bacteroidota
TTC
Glu
>WENV183179615
OLPH01007781
95875
Bacteroidota
TAG
Leu
>WENV183179749
OLPH01014239
151121
Bacteroidota
CAT
Met
>WENV183180131
OLPH01065672
338314
Bacteroidota
CCT
Arg
>WENV183179929
OLPH01029989
172372
Bacteroidota
TGC
Ala
>WENV183178521
OLPH01000154
240012
Bacteroidota
CCC
Gly
>WENV183178579
OLPH01000224
240012
Bacteroidota
CCC
Gly
>WENV183178869
OLPH01000706
44852
Bacteroidota
TAA
Leu
>WENV183178811
OLPH01000550
147439
Bacteroidota
TCT
Arg
>WENV183178290
OLPH01000007
150485
Bacteroidota
GTT
Asn
>WENV183178313
OLPH01000015
411550
Bacteroidota
CTG
Gln
>WENV183178715
OLPH01000394
132360
Bacteroidota
GGG
Pro
>WENV183180087
OLPH01057214
132360
Bacteroidota
GGG
Pro
>WENV183178394
OLPH01000064
353927
Bacteroidota
TTC
Glu
>WENV183178909
OLPH01000794
353927
Bacteroidota
TTC
Glu
>WENV183179783
OLPH01016043
353927
Bacteroidota
TTC
Glu
>WENV183179532
OLPH01005764
146530
Bacteroidota
TGT
Thr
>WENV183178606
OLPH01000248
23696
Bacteroidota
GCT
Ser
>WENV183178577
OLPH01000213
414426
Bacteroidota
CTG
Gln
>WENV183178671
OLPH01000330
414426
Bacteroidota
CTG
Gln
>WENV183179353
OLPH01003110
413953
Bacteroidota
GCA
Cys
>WENV183178773
OLPH01000489
16224
Bacteroidota
GGA
Ser
>WENV183179358
OLPH01003144
151960
Bacteroidota
GGC
Ala
>WENV183179344
OLPH01002983
16220
Bacteroidota
GGA
Ser
>WENV183179496
OLPH01005083
338125
Bacteroidota
CCT
Arg
>WENV183179884
OLPH01024802
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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