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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183227561
OLQQ01000111
24650
Bacillota
TAA
Leu
>WENV183227620
OLQQ01000258
24650
Bacillota
TAA
Leu
>WENV183227737
OLQQ01000853
24650
Bacillota
TAA
Leu
>WENV183227998
OLQQ01010553
196621
Bacillota
GTC
Asp
>WENV183228010
OLQQ01011858
309417
Bacillota
GGC
Ala
>WENV183227817
OLQQ01002058
267649
Bacillota
TAC
Val
>WENV183227969
OLQQ01007573
235287
Bacillota
TTT
Lys
>WENV183227536
OLQQ01000063
339890
Bacillota
TTG
Gln
>WENV183227908
OLQQ01004459
98228
Bacillota
TAG
Leu
>WENV183228089
OLQQ01028175
237387
Bacillota
TGT
Thr
>WENV183228055
OLQQ01018306
44854
Bacillota
TGA
Ser
>WENV183227614
OLQQ01000258
235154
Bacillota
GTT
Asn
>WENV183227997
OLQQ01010553
304022
Bacillota
GCC
Gly
>WENV183227936
OLQQ01005335
147639
Bacillota
ACG
Arg
>WENV183227852
OLQQ01002507
97943
Bacillota
GTA
Tyr
>WENV183227995
OLQQ01010265
97943
Bacillota
GTA
Tyr
>WENV183227572
OLQQ01000126
338147
Bacillota
CTC
Glu
>WENV183227637
OLQQ01000312
338147
Bacillota
CTC
Glu
>WENV183227618
OLQQ01000258
198770
Bacillota
GTC
Asp
>WENV183227685
OLQQ01000462
429429
Bacillota
CCA
Trp
>WENV183227717
OLQQ01000749
429429
Bacillota
CCA
Trp
>WENV183227552
OLQQ01000097
313454
Bacillota
GAA
Phe
>WENV183227796
OLQQ01001730
44859
Bacillota
AAG
Leu
>WENV183227968
OLQQ01007573
235290
Bacillota
TTG
Gln
>WENV183227974
OLQQ01007573
144763
Bacillota
TGG
Pro
>WENV183227930
OLQQ01005335
316443
Bacillota
GTC
Asp
>WENV183228064
OLQQ01021831
338149
Bacillota
CTC
Glu
>WENV183227972
OLQQ01007573
144766
Bacillota
CAT
Met
>WENV183227588
OLQQ01000166
37269
Bacillota
TGA
Ser
>WENV183227638
OLQQ01000325
37269
Bacillota
TGA
Ser
>WENV183227583
OLQQ01000147
287000
Bacillota
GTT
Asn
>WENV183227732
OLQQ01000827
258936
Bacillota
GGT
Thr
>WENV183227768
OLQQ01001380
258936
Bacillota
GGT
Thr
>WENV183227771
OLQQ01001419
173810
Bacillota
CAT
Met
>WENV183227492
OLQQ01000029
152492
Bacillota
GGG
Pro
>WENV183227611
OLQQ01000235
152492
Bacillota
GGG
Pro
>WENV183227779
OLQQ01001463
152492
Bacillota
GGG
Pro
>WENV183227862
OLQQ01002780
152492
Bacillota
GGG
Pro
>WENV183227894
OLQQ01003807
152492
Bacillota
GGG
Pro
>WENV183227976
OLQQ01007573
411585
Bacillota
GCA
Cys
>WENV183228044
OLQQ01016053
353537
Bacillota
GTT
Asn
>WENV183227593
OLQQ01000178
147684
Bacillota
ACG
Arg
>WENV183227700
OLQQ01000554
147684
Bacillota
ACG
Arg
>WENV183227555
OLQQ01000103
412387
Bacillota
GCA
Cys
>WENV183227556
OLQQ01000103
412387
Bacillota
GCA
Cys
>WENV183227932
OLQQ01005335
109476
Bacillota
TAG
Leu
>WENV183228024
OLQQ01013768
198159
Bacillota
CAT
Met
>WENV183228099
OLQQ01030319
340986
Bacillota
CCT
Arg
>WENV183227600
OLQQ01000206
235142
Bacillota
CTT
Lys
>WENV183227680
OLQQ01000440
41203
Bacillota
AAG
Leu
>WENV183227975
OLQQ01007573
144767
Bacillota
GTG
His
>WENV183228031
OLQQ01014427
148188
Bacillota
CCG
Arg
>WENV183227959
OLQQ01006850
80612
Bacillota
GTA
Tyr
>WENV183228070
OLQQ01021972
236012
Bacillota
GTC
Asp
>WENV183227537
OLQQ01000063
235127
Bacillota
TTT
Lys
>WENV183227703
OLQQ01000579
235127
Bacillota
TTT
Lys
>WENV183227534
OLQQ01000063
147674
Bacillota
TCT
Arg
>WENV183227950
OLQQ01006538
298620
Bacillota
CAT
Met
>WENV183227616
OLQQ01000258
241432
Bacillota
TGT
Thr
>WENV183227978
OLQQ01007573
235288
Bacillota
TAC
Val
>WENV183228058
OLQQ01019468
411739
Bacillota
TCC
Gly
>WENV183227946
OLQQ01005958
235638
Bacillota
GAA
Phe
>WENV183228003
OLQQ01011035
235124
Bacillota
TGG
Pro
>WENV183228017
OLQQ01013155
237963
Bacillota
TTT
Lys
>WENV183228015
OLQQ01013155
279635
Bacillota
GTG
His
>WENV183228079
OLQQ01025764
144583
Bacillota
ACG
Arg
>WENV183227912
OLQQ01004553
353527
Bacillota
TTC
Glu
>WENV183228013
OLQQ01012980
58712
Bacillota
CAG
Leu
>WENV183228083
OLQQ01027384
144762
Bacillota
TCT
Arg
>WENV183228065
OLQQ01021831
272992
Bacillota
CTT
Lys
>WENV183227848
OLQQ01002493
299139
Bacillota
TGC
Ala
>WENV183227895
OLQQ01003832
95563
Bacillota
GTA
Tyr
>WENV183227828
OLQQ01002249
272488
Bacillota
GAA
Phe
>WENV183227563
OLQQ01000111
119513
Bacillota
CAA
Leu
>WENV183228087
OLQQ01028175
146770
Bacillota
TTC
Glu
>WENV183227918
OLQQ01004917
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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