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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183230680
OLQT01004392
235146
Actinomycetota
CGT
Thr
>WENV183231209
OLQT01050738
119475
Actinomycetota
TAA
Leu
>WENV183231120
OLQT01030098
166493
Actinomycetota
CTT
Lys
>WENV183230114
OLQT01000210
245301
Actinomycetota
GCC
Gly
>WENV183231134
OLQT01031575
144826
Actinomycetota
GGG
Pro
>WENV183231219
OLQT01052313
23370
Actinomycetota
GCT
Ser
>WENV183231102
OLQT01027833
338239
Actinomycetota
TTC
Glu
>WENV183231123
OLQT01030247
162208
Actinomycetota
TAC
Val
>WENV183230707
OLQT01004870
235174
Actinomycetota
TGC
Ala
>WENV183230984
OLQT01017553
235101
Actinomycetota
TTT
Lys
>WENV183230955
OLQT01015876
356045
Actinomycetota
GAC
Val
>WENV183231158
OLQT01036392
147732
Actinomycetota
GTC
Asp
>WENV183230453
OLQT01001643
153948
Actinomycetota
GGG
Pro
>WENV183230583
OLQT01002795
153948
Actinomycetota
GGG
Pro
>WENV183230956
OLQT01015876
235199
Actinomycetota
CAC
Val
>WENV183230546
OLQT01002291
44862
Actinomycetota
CGA
Ser
>WENV183230709
OLQT01004892
367535
Actinomycetota
CTG
Gln
>WENV183230782
OLQT01007185
413665
Actinomycetota
TTG
Gln
>WENV183230822
OLQT01009155
254857
Actinomycetota
CCG
Arg
>WENV183231179
OLQT01041192
144700
Actinomycetota
CAT
Met
>WENV183230591
OLQT01002898
144636
Actinomycetota
GAT
Ile
>WENV183230708
OLQT01004892
243671
Actinomycetota
CTC
Glu
>WENV183231247
OLQT01065497
176456
Actinomycetota
TCT
Arg
>WENV183231229
OLQT01056951
144825
Actinomycetota
CAT
Met
>WENV183229928
OLQT01000020
144907
Actinomycetota
GGG
Pro
>WENV183231052
OLQT01023909
144595
Actinomycetota
CAA
Leu
>WENV183231165
OLQT01037802
235149
Actinomycetota
CCT
Arg
>WENV183229873
OLQT01000005
240009
Actinomycetota
GGC
Ala
>WENV183230870
OLQT01011289
47164
Actinomycetota
GGA
Ser
>WENV183230776
OLQT01006744
61501
Actinomycetota
CAG
Leu
>WENV183230919
OLQT01014279
61501
Actinomycetota
CAG
Leu
>WENV183230963
OLQT01016489
80622
Actinomycetota
CAG
Leu
>WENV183230715
OLQT01005157
44851
Actinomycetota
TGA
Ser
>WENV183230699
OLQT01004651
158513
Actinomycetota
TGG
Pro
>WENV183230115
OLQT01000210
412834
Actinomycetota
GCA
Cys
>WENV183230797
OLQT01008025
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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