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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183243687
OLRD01000572
243025
Bacteroidota
CAT
Met
>WENV183243359
OLRD01000011
338155
Bacteroidota
CTC
Glu
>WENV183243530
OLRD01000173
17323
Bacteroidota
GGA
Ser
>WENV183243559
OLRD01000225
344692
Bacteroidota
GGT
Thr
>WENV183244246
OLRD01016566
344692
Bacteroidota
GGT
Thr
>WENV183243414
OLRD01000043
341950
Bacteroidota
>WENV183243492
OLRD01000128
126641
Bacteroidota
TAC
Val
>WENV183243473
OLRD01000099
338132
Bacteroidota
GCA
Cys
>WENV183243632
OLRD01000414
144933
Bacteroidota
TCT
Arg
>WENV183243353
OLRD01000007
16999
Bacteroidota
GGA
Ser
>WENV183243779
OLRD01000985
52358
Bacteroidota
TGA
Ser
>WENV183243412
OLRD01000043
132360
Bacteroidota
GGG
Pro
>WENV183243333
OLRD01000001
425638
Bacteroidota
CTG
Gln
>WENV183243348
OLRD01000004
239647
Bacteroidota
TTT
Lys
>WENV183243357
OLRD01000011
239647
Bacteroidota
TTT
Lys
>WENV183244349
OLRD01042252
353927
Bacteroidota
TTC
Glu
>WENV183243561
OLRD01000230
185921
Bacteroidota
GTC
Asp
>WENV183243706
OLRD01000683
414426
Bacteroidota
CTG
Gln
>WENV183243350
OLRD01000006
338125
Bacteroidota
CCT
Arg
>WENV183243415
OLRD01000044
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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