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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183270750
OLRV01019478
246701
Verrucomicrobiota
TTT
Lys
>WENV183270282
OLRV01005179
345141
Verrucomicrobiota
TTG
Gln
>WENV183270466
OLRV01009011
345133
Verrucomicrobiota
GAC
Val
>WENV183270754
OLRV01019661
82054
Verrucomicrobiota
GTA
Tyr
>WENV183270859
OLRV01025997
246677
Verrucomicrobiota
CTT
Lys
>WENV183270860
OLRV01025997
246677
Verrucomicrobiota
CTT
Lys
>WENV183270275
OLRV01005068
344844
Verrucomicrobiota
GCA
Cys
>WENV183270187
OLRV01004171
155264
Verrucomicrobiota
GGG
Pro
>WENV183270578
OLRV01012133
344845
Verrucomicrobiota
CTG
Gln
>WENV183270093
OLRV01003346
128202
Verrucomicrobiota
GTC
Asp
>WENV183270550
OLRV01011154
414625
Verrucomicrobiota
CCC
Gly
>WENV183270398
OLRV01007268
46246
Verrucomicrobiota
TGA
Ser
>WENV183270732
OLRV01018244
97755
Verrucomicrobiota
TAG
Leu
>WENV183270002
OLRV01002625
246700
Verrucomicrobiota
TTC
Glu
>WENV183270149
OLRV01003810
246687
Verrucomicrobiota
CGC
Ala
>WENV183270549
OLRV01011154
419909
Verrucomicrobiota
TCC
Gly
>WENV183270833
OLRV01024339
344841
Verrucomicrobiota
CAC
Val
>WENV183270407
OLRV01007420
60880
Verrucomicrobiota
CAG
Leu
>WENV183270858
OLRV01025997
344842
Verrucomicrobiota
CGT
Thr
>WENV183270336
OLRV01006108
170105
Verrucomicrobiota
CAT
Met
>WENV183270586
OLRV01012338
287733
Verrucomicrobiota
CCA
Trp
>WENV183270421
OLRV01007785
345123
Verrucomicrobiota
TGT
Thr
>WENV183271044
OLRV01047964
345110
Verrucomicrobiota
CCT
Arg
>WENV183270619
OLRV01013797
344839
Verrucomicrobiota
GTG
His
>WENV183270144
OLRV01003720
7274
Verrucomicrobiota
CGA
Ser
>WENV183270877
OLRV01026397
246260
Verrucomicrobiota
>WENV183271240
OLRV01090564
155268
Verrucomicrobiota
CGG
Pro
>WENV183270735
OLRV01018453
82181
Verrucomicrobiota
AAG
Leu
>WENV183271092
OLRV01057784
7256
Verrucomicrobiota
GCT
Ser
>WENV183270535
OLRV01010944
345115
Verrucomicrobiota
CAT
Met
>WENV183270097
OLRV01003411
17023
Verrucomicrobiota
GGA
Ser
>WENV183270917
OLRV01030248
368497
Verrucomicrobiota
GCC
Gly
>WENV183270198
OLRV01004275
345142
Verrucomicrobiota
CCG
Arg
>WENV183270620
OLRV01013797
246709
Verrucomicrobiota
CAT
Met
>WENV183270536
OLRV01010999
154693
Verrucomicrobiota
TGG
Pro
>WENV183270180
OLRV01004062
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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