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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183272607
OLRX01000050
119661
Verrucomicrobiota
CAA
Leu
>WENV183272712
OLRX01000244
155256
Verrucomicrobiota
TCT
Arg
>WENV183272514
OLRX01000004
246701
Verrucomicrobiota
TTT
Lys
>WENV183272702
OLRX01000211
345141
Verrucomicrobiota
TTG
Gln
>WENV183272669
OLRX01000126
345133
Verrucomicrobiota
GAC
Val
>WENV183272516
OLRX01000005
82054
Verrucomicrobiota
GTA
Tyr
>WENV183272787
OLRX01000393
246677
Verrucomicrobiota
CTT
Lys
>WENV183272788
OLRX01000393
246677
Verrucomicrobiota
CTT
Lys
>WENV183272994
OLRX01001354
344844
Verrucomicrobiota
GCA
Cys
>WENV183272671
OLRX01000127
155264
Verrucomicrobiota
GGG
Pro
>WENV183272728
OLRX01000265
344845
Verrucomicrobiota
CTG
Gln
>WENV183272518
OLRX01000005
128202
Verrucomicrobiota
GTC
Asp
>WENV183272727
OLRX01000265
128202
Verrucomicrobiota
GTC
Asp
>WENV183272929
OLRX01000952
414625
Verrucomicrobiota
CCC
Gly
>WENV183272609
OLRX01000052
46246
Verrucomicrobiota
TGA
Ser
>WENV183272704
OLRX01000213
97755
Verrucomicrobiota
TAG
Leu
>WENV183272611
OLRX01000052
246700
Verrucomicrobiota
TTC
Glu
>WENV183272995
OLRX01001354
246700
Verrucomicrobiota
TTC
Glu
>WENV183272641
OLRX01000077
246687
Verrucomicrobiota
CGC
Ala
>WENV183272930
OLRX01000952
419909
Verrucomicrobiota
TCC
Gly
>WENV183272707
OLRX01000218
344841
Verrucomicrobiota
CAC
Val
>WENV183272610
OLRX01000052
405704
Verrucomicrobiota
GCC
Gly
>WENV183272662
OLRX01000113
405704
Verrucomicrobiota
GCC
Gly
>WENV183272905
OLRX01000774
60880
Verrucomicrobiota
CAG
Leu
>WENV183272749
OLRX01000310
82056
Verrucomicrobiota
TAA
Leu
>WENV183272786
OLRX01000393
344842
Verrucomicrobiota
CGT
Thr
>WENV183272605
OLRX01000043
170105
Verrucomicrobiota
CAT
Met
>WENV183273015
OLRX01001504
287733
Verrucomicrobiota
CCA
Trp
>WENV183272640
OLRX01000077
345123
Verrucomicrobiota
TGT
Thr
>WENV183272703
OLRX01000213
345110
Verrucomicrobiota
CCT
Arg
>WENV183272612
OLRX01000052
344839
Verrucomicrobiota
GTG
His
>WENV183272677
OLRX01000133
7274
Verrucomicrobiota
CGA
Ser
>WENV183272750
OLRX01000310
246260
Verrucomicrobiota
>WENV183272789
OLRX01000393
155268
Verrucomicrobiota
CGG
Pro
>WENV183272615
OLRX01000056
82181
Verrucomicrobiota
AAG
Leu
>WENV183272672
OLRX01000127
246728
Verrucomicrobiota
GAA
Phe
>WENV183272751
OLRX01000310
7256
Verrucomicrobiota
GCT
Ser
>WENV183272608
OLRX01000052
345115
Verrucomicrobiota
CAT
Met
>WENV183272670
OLRX01000126
345119
Verrucomicrobiota
TAC
Val
>WENV183272515
OLRX01000005
345124
Verrucomicrobiota
GTT
Asn
>WENV183272517
OLRX01000005
17023
Verrucomicrobiota
GGA
Ser
>WENV183272626
OLRX01000068
345142
Verrucomicrobiota
CCG
Arg
>WENV183272613
OLRX01000052
246709
Verrucomicrobiota
CAT
Met
>WENV183272673
OLRX01000127
154693
Verrucomicrobiota
TGG
Pro
>WENV183273014
OLRX01001504
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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