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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183277523
OLSA01001258
141635
Bacteroidota
TAC
Val
>WENV183278175
OLSA01008070
235102
Bacteroidota
CGT
Thr
>WENV183277736
OLSA01002634
267954
Bacteroidota
GCC
Gly
>WENV183277737
OLSA01002634
267954
Bacteroidota
GCC
Gly
>WENV183278031
OLSA01005497
144657
Bacteroidota
CGG
Pro
>WENV183277150
OLSA01000109
243025
Bacteroidota
CAT
Met
>WENV183277515
OLSA01001241
243025
Bacteroidota
CAT
Met
>WENV183278407
OLSA01015335
243025
Bacteroidota
CAT
Met
>WENV183278651
OLSA01031587
338155
Bacteroidota
CTC
Glu
>WENV183277631
OLSA01001830
58715
Bacteroidota
GAG
Leu
>WENV183278949
OLSA01092756
46165
Bacteroidota
TGA
Ser
>WENV183277642
OLSA01001891
17323
Bacteroidota
GGA
Ser
>WENV183277747
OLSA01002673
338486
Bacteroidota
CAT
Met
>WENV183278817
OLSA01054774
59689
Bacteroidota
CAG
Leu
>WENV183277989
OLSA01004822
436206
Bacteroidota
TTG
Gln
>WENV183278165
OLSA01007769
155123
Bacteroidota
GTT
Asn
>WENV183278166
OLSA01007769
155123
Bacteroidota
GTT
Asn
>WENV183277889
OLSA01003731
344692
Bacteroidota
GGT
Thr
>WENV183278071
OLSA01006278
344692
Bacteroidota
GGT
Thr
>WENV183277545
OLSA01001344
145504
Bacteroidota
TGT
Thr
>WENV183277718
OLSA01002476
338124
Bacteroidota
CCG
Arg
>WENV183277254
OLSA01000287
235203
Bacteroidota
TTT
Lys
>WENV183278011
OLSA01004987
238121
Bacteroidota
CTT
Lys
>WENV183277499
OLSA01001158
338132
Bacteroidota
GCA
Cys
>WENV183278828
OLSA01056078
144688
Bacteroidota
CAT
Met
>WENV183277269
OLSA01000331
58714
Bacteroidota
CAA
Leu
>WENV183277202
OLSA01000178
301449
Bacteroidota
CGG
Pro
>WENV183277508
OLSA01001210
301449
Bacteroidota
CGG
Pro
>WENV183277637
OLSA01001868
144933
Bacteroidota
TCT
Arg
>WENV183278086
OLSA01006450
141414
Bacteroidota
GGG
Pro
>WENV183278293
OLSA01010938
303954
Bacteroidota
GCC
Gly
>WENV183277674
OLSA01002137
136207
Bacteroidota
TAC
Val
>WENV183277675
OLSA01002137
136207
Bacteroidota
TAC
Val
>WENV183277561
OLSA01001430
144656
Bacteroidota
GTG
His
>WENV183277735
OLSA01002599
235207
Bacteroidota
CAT
Met
>WENV183278036
OLSA01005543
144596
Bacteroidota
GGC
Ala
>WENV183277819
OLSA01003157
80607
Bacteroidota
GTA
Tyr
>WENV183277449
OLSA01000942
80614
Bacteroidota
>WENV183277132
OLSA01000091
154643
Bacteroidota
CAT
Met
>WENV183278146
OLSA01007621
144655
Bacteroidota
GGC
Ala
>WENV183277359
OLSA01000577
95875
Bacteroidota
TAG
Leu
>WENV183277763
OLSA01002791
240012
Bacteroidota
CCC
Gly
>WENV183277581
OLSA01001513
44852
Bacteroidota
TAA
Leu
>WENV183278862
OLSA01063797
147439
Bacteroidota
TCT
Arg
>WENV183277050
OLSA01000021
425638
Bacteroidota
CTG
Gln
>WENV183278032
OLSA01005510
19317
Bacteroidota
GGA
Ser
>WENV183277503
OLSA01001167
353927
Bacteroidota
TTC
Glu
>WENV183277604
OLSA01001639
353927
Bacteroidota
TTC
Glu
>WENV183277629
OLSA01001824
353927
Bacteroidota
TTC
Glu
>WENV183278083
OLSA01006438
353927
Bacteroidota
TTC
Glu
>WENV183278946
OLSA01090864
146530
Bacteroidota
TGT
Thr
>WENV183277769
OLSA01002855
414426
Bacteroidota
CTG
Gln
>WENV183278626
OLSA01029040
414426
Bacteroidota
CTG
Gln
>WENV183277586
OLSA01001524
16224
Bacteroidota
GGA
Ser
>WENV183277544
OLSA01001343
151960
Bacteroidota
GGC
Ala
>WENV183277733
OLSA01002578
151960
Bacteroidota
GGC
Ala
>WENV183278437
OLSA01016905
151960
Bacteroidota
GGC
Ala
>WENV183277702
OLSA01002346
338125
Bacteroidota
CCT
Arg
>WENV183278131
OLSA01007357
338125
Bacteroidota
CCT
Arg
>WENV183277189
OLSA01000153
235129
Bacteroidota
GCC
Gly
>WENV183277513
OLSA01001232
313363
Bacteroidota
GAA
Phe
>WENV183278057
OLSA01006052
313363
Bacteroidota
GAA
Phe
>WENV183278315
OLSA01011819
313363
Bacteroidota
GAA
Phe
>WENV183278500
OLSA01020632
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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