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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183301316
OLSP01000046
235097
Bacteroidota
TTT
Lys
>WENV183301879
OLSP01002922
235097
Bacteroidota
TTT
Lys
>WENV183302639
OLSP01066315
141635
Bacteroidota
TAC
Val
>WENV183301599
OLSP01000795
235102
Bacteroidota
CGT
Thr
>WENV183302568
OLSP01044002
267954
Bacteroidota
GCC
Gly
>WENV183301838
OLSP01002363
243025
Bacteroidota
CAT
Met
>WENV183302010
OLSP01004546
338155
Bacteroidota
CTC
Glu
>WENV183301548
OLSP01000626
58715
Bacteroidota
GAG
Leu
>WENV183301321
OLSP01000060
338486
Bacteroidota
CAT
Met
>WENV183301486
OLSP01000439
436206
Bacteroidota
TTG
Gln
>WENV183301547
OLSP01000619
436206
Bacteroidota
TTG
Gln
>WENV183302597
OLSP01049232
145504
Bacteroidota
TGT
Thr
>WENV183301899
OLSP01003081
338124
Bacteroidota
CCG
Arg
>WENV183301754
OLSP01001564
238121
Bacteroidota
CTT
Lys
>WENV183301938
OLSP01003595
126641
Bacteroidota
TAC
Val
>WENV183301304
OLSP01000036
338132
Bacteroidota
GCA
Cys
>WENV183301433
OLSP01000326
338132
Bacteroidota
GCA
Cys
>WENV183301603
OLSP01000816
338132
Bacteroidota
GCA
Cys
>WENV183302575
OLSP01044428
235165
Bacteroidota
CCA
Trp
>WENV183301753
OLSP01001556
280660
Bacteroidota
CCA
Trp
>WENV183302599
OLSP01049362
144933
Bacteroidota
TCT
Arg
>WENV183301385
OLSP01000213
144933
Bacteroidota
TCT
Arg
>WENV183301364
OLSP01000167
303954
Bacteroidota
GCC
Gly
>WENV183301802
OLSP01002137
144656
Bacteroidota
GTG
His
>WENV183301584
OLSP01000744
235207
Bacteroidota
CAT
Met
>WENV183301655
OLSP01001069
143169
Bacteroidota
GGG
Pro
>WENV183301337
OLSP01000104
144596
Bacteroidota
GGC
Ala
>WENV183301342
OLSP01000118
80607
Bacteroidota
GTA
Tyr
>WENV183302072
OLSP01005330
80607
Bacteroidota
GTA
Tyr
>WENV183302155
OLSP01006883
80614
Bacteroidota
>WENV183301762
OLSP01001602
154643
Bacteroidota
CAT
Met
>WENV183302275
OLSP01010513
95559
Bacteroidota
TAG
Leu
>WENV183302058
OLSP01004983
144655
Bacteroidota
GGC
Ala
>WENV183302609
OLSP01054037
144639
Bacteroidota
GGC
Ala
>WENV183301801
OLSP01002110
95875
Bacteroidota
TAG
Leu
>WENV183301974
OLSP01004085
151121
Bacteroidota
CAT
Met
>WENV183301649
OLSP01001051
240012
Bacteroidota
CCC
Gly
>WENV183302626
OLSP01058399
150485
Bacteroidota
GTT
Asn
>WENV183302306
OLSP01011492
19528
Bacteroidota
GGA
Ser
>WENV183301458
OLSP01000367
425638
Bacteroidota
CTG
Gln
>WENV183301534
OLSP01000576
425638
Bacteroidota
CTG
Gln
>WENV183302069
OLSP01005245
239647
Bacteroidota
TTT
Lys
>WENV183301862
OLSP01002727
353927
Bacteroidota
TTC
Glu
>WENV183301995
OLSP01004436
185921
Bacteroidota
GTC
Asp
>WENV183301978
OLSP01004202
414426
Bacteroidota
CTG
Gln
>WENV183301462
OLSP01000379
56823
Bacteroidota
TGA
Ser
>WENV183302074
OLSP01005397
56823
Bacteroidota
TGA
Ser
>WENV183302428
OLSP01021229
16224
Bacteroidota
GGA
Ser
>WENV183301981
OLSP01004228
16220
Bacteroidota
GGA
Ser
>WENV183301906
OLSP01003156
338125
Bacteroidota
CCT
Arg
>WENV183302459
OLSP01025011
338125
Bacteroidota
CCT
Arg
>WENV183302342
OLSP01013318
235129
Bacteroidota
GCC
Gly
>WENV183301857
OLSP01002645
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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