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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183304235
OLSQ01022977
155958
Bacillota
GAT
Ile
>WENV183304108
OLSQ01016313
202812
Bacillota
CAT
Met
>WENV183304180
OLSQ01020349
158247
Bacillota
>WENV183304385
OLSQ01037884
37213
Bacillota
TGA
Ser
>WENV183303745
OLSQ01005470
144612
Bacillota
TCT
Arg
>WENV183302939
OLSQ01000188
154063
Bacillota
CGG
Pro
>WENV183303781
OLSQ01006275
267649
Bacillota
TAC
Val
>WENV183302973
OLSQ01000239
267556
Bacillota
TAC
Val
>WENV183303771
OLSQ01006012
235098
Bacillota
GAC
Val
>WENV183304002
OLSQ01011375
235098
Bacillota
GAC
Val
>WENV183303179
OLSQ01000619
338152
Bacillota
TTC
Glu
>WENV183303383
OLSQ01001602
44854
Bacillota
TGA
Ser
>WENV183303245
OLSQ01000786
235154
Bacillota
GTT
Asn
>WENV183304598
OLSQ01082246
144577
Bacillota
GAT
Ile
>WENV183304124
OLSQ01017523
347827
Bacillota
TTC
Glu
>WENV183303415
OLSQ01001814
302150
Bacillota
TAC
Val
>WENV183302724
OLSQ01000019
307003
Bacillota
TGC
Ala
>WENV183303408
OLSQ01001784
59312
Bacillota
CAG
Leu
>WENV183303595
OLSQ01003694
59312
Bacillota
CAG
Leu
>WENV183304439
OLSQ01044735
235150
Bacillota
TGC
Ala
>WENV183303960
OLSQ01010036
155273
Bacillota
CAT
Met
>WENV183303330
OLSQ01001212
293599
Bacillota
CTT
Lys
>WENV183302912
OLSQ01000150
429429
Bacillota
CCA
Trp
>WENV183303362
OLSQ01001484
429429
Bacillota
CCA
Trp
>WENV183303352
OLSQ01001375
313454
Bacillota
GAA
Phe
>WENV183303467
OLSQ01002387
313454
Bacillota
GAA
Phe
>WENV183303170
OLSQ01000595
41154
Bacillota
TAA
Leu
>WENV183304549
OLSQ01066156
11034
Bacillota
GGA
Ser
>WENV183302741
OLSQ01000028
274189
Bacillota
TGT
Thr
>WENV183302831
OLSQ01000086
274189
Bacillota
TGT
Thr
>WENV183304275
OLSQ01025746
173314
Bacillota
GAT
Ile
>WENV183303948
OLSQ01009893
316443
Bacillota
GTC
Asp
>WENV183303894
OLSQ01008192
338149
Bacillota
CTC
Glu
>WENV183303927
OLSQ01009174
338149
Bacillota
CTC
Glu
>WENV183303989
OLSQ01010762
338149
Bacillota
CTC
Glu
>WENV183304292
OLSQ01027172
338149
Bacillota
CTC
Glu
>WENV183303540
OLSQ01003030
245298
Bacillota
CGG
Pro
>WENV183303878
OLSQ01008012
245298
Bacillota
CGG
Pro
>WENV183303988
OLSQ01010711
245298
Bacillota
CGG
Pro
>WENV183303056
OLSQ01000355
37269
Bacillota
TGA
Ser
>WENV183303178
OLSQ01000619
287000
Bacillota
GTT
Asn
>WENV183304587
OLSQ01078076
201704
Bacillota
GAT
Ile
>WENV183303224
OLSQ01000718
152492
Bacillota
GGG
Pro
>WENV183304221
OLSQ01021957
338676
Bacillota
CCG
Arg
>WENV183304373
OLSQ01035336
153911
Bacillota
GAT
Ile
>WENV183302692
OLSQ01000007
240017
Bacillota
GCC
Gly
>WENV183302922
OLSQ01000159
240017
Bacillota
GCC
Gly
>WENV183303539
OLSQ01003030
411547
Bacillota
CTG
Gln
>WENV183303643
OLSQ01004283
411547
Bacillota
CTG
Gln
>WENV183303877
OLSQ01008012
411547
Bacillota
CTG
Gln
>WENV183303987
OLSQ01010711
411547
Bacillota
CTG
Gln
>WENV183304038
OLSQ01013008
411547
Bacillota
CTG
Gln
>WENV183303384
OLSQ01001602
4624
Bacillota
GCT
Ser
>WENV183302691
OLSQ01000007
263765
Bacillota
TAC
Val
>WENV183302919
OLSQ01000159
263765
Bacillota
TAC
Val
>WENV183303133
OLSQ01000504
263765
Bacillota
TAC
Val
>WENV183304224
OLSQ01022174
263765
Bacillota
TAC
Val
>WENV183304048
OLSQ01013570
412387
Bacillota
GCA
Cys
>WENV183303950
OLSQ01009893
109476
Bacillota
TAG
Leu
>WENV183302745
OLSQ01000029
248683
Bacillota
TTT
Lys
>WENV183304030
OLSQ01012812
235095
Bacillota
GGT
Thr
>WENV183303464
OLSQ01002387
239832
Bacillota
TGT
Thr
>WENV183303328
OLSQ01001208
419639
Bacillota
GCA
Cys
>WENV183303416
OLSQ01001839
411549
Bacillota
TTG
Gln
>WENV183304066
OLSQ01014318
411549
Bacillota
TTG
Gln
>WENV183303778
OLSQ01006196
148188
Bacillota
CCG
Arg
>WENV183303861
OLSQ01007527
148188
Bacillota
CCG
Arg
>WENV183303943
OLSQ01009719
148188
Bacillota
CCG
Arg
>WENV183304522
OLSQ01059883
80612
Bacillota
GTA
Tyr
>WENV183303476
OLSQ01002523
256380
Bacillota
>WENV183303058
OLSQ01000357
163943
Bacillota
GTC
Asp
>WENV183303378
OLSQ01001578
163943
Bacillota
GTC
Asp
>WENV183304023
OLSQ01012569
298620
Bacillota
CAT
Met
>WENV183303412
OLSQ01001814
241432
Bacillota
TGT
Thr
>WENV183303608
OLSQ01003842
235124
Bacillota
TGG
Pro
>WENV183303756
OLSQ01005778
235124
Bacillota
TGG
Pro
>WENV183303836
OLSQ01007265
235124
Bacillota
TGG
Pro
>WENV183304541
OLSQ01063819
338129
Bacillota
TGT
Thr
>WENV183302920
OLSQ01000159
157838
Bacillota
GTC
Asp
>WENV183303316
OLSQ01001133
157838
Bacillota
GTC
Asp
>WENV183303702
OLSQ01004845
144583
Bacillota
ACG
Arg
>WENV183303895
OLSQ01008192
144621
Bacillota
GTT
Asn
>WENV183303928
OLSQ01009174
144621
Bacillota
GTT
Asn
>WENV183303990
OLSQ01010762
144621
Bacillota
GTT
Asn
>WENV183304293
OLSQ01027172
144621
Bacillota
GTT
Asn
>WENV183302968
OLSQ01000232
243098
Bacillota
GGT
Thr
>WENV183303561
OLSQ01003276
58712
Bacillota
CAG
Leu
>WENV183303742
OLSQ01005422
245296
Bacillota
CCC
Gly
>WENV183303968
OLSQ01010277
245296
Bacillota
CCC
Gly
>WENV183303985
OLSQ01010582
245296
Bacillota
CCC
Gly
>WENV183302845
OLSQ01000098
344240
Bacillota
GCC
Gly
>WENV183302964
OLSQ01000230
344240
Bacillota
GCC
Gly
>WENV183303327
OLSQ01001208
344240
Bacillota
GCC
Gly
>WENV183302963
OLSQ01000230
196632
Bacillota
GTC
Asp
>WENV183302999
OLSQ01000295
196632
Bacillota
GTC
Asp
>WENV183303325
OLSQ01001208
196632
Bacillota
GTC
Asp
>WENV183304088
OLSQ01015271
248965
Bacillota
GCC
Gly
>WENV183302707
OLSQ01000013
178024
Bacillota
TCT
Arg
>WENV183303956
OLSQ01009989
299139
Bacillota
TGC
Ala
>WENV183304274
OLSQ01025746
299139
Bacillota
TGC
Ala
>WENV183303551
OLSQ01003188
144594
Bacillota
CAC
Val
>WENV183303683
OLSQ01004735
414486
Bacillota
CCC
Gly
>WENV183303473
OLSQ01002462
114075
Bacillota
TAG
Leu
>WENV183304395
OLSQ01038765
292012
Bacillota
TGC
Ala
>WENV183303554
OLSQ01003191
338128
Bacillota
TTC
Glu
>WENV183304472
OLSQ01049746
338128
Bacillota
TTC
Glu
>WENV183303000
OLSQ01000295
245344
Bacillota
GAA
Phe
>WENV183303326
OLSQ01001208
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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