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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183309972
OLVL01001856
235092
Actinomycetota
CCG
Arg
>WENV183309957
OLVL01000368
235101
Actinomycetota
TTT
Lys
>WENV183309951
OLVL01000098
144593
Actinomycetota
TAT
Ile
>WENV183309978
OLVL01002078
44942
Actinomycetota
TGA
Ser
>WENV183309949
OLVL01000060
243671
Actinomycetota
CTC
Glu
>WENV183309958
OLVL01000411
98279
Actinomycetota
GTA
Tyr
>WENV183309950
OLVL01000060
338148
Actinomycetota
CTG
Gln
>WENV183309980
OLVL01002447
235148
Actinomycetota
GTT
Asn
>WENV183309946
OLVL01000011
16467
Actinomycetota
GCT
Ser
>WENV183309962
OLVL01000581
411554
Actinomycetota
CCC
Gly
>WENV183309966
OLVL01001131
235121
Actinomycetota
CGT
Thr
>WENV183309969
OLVL01001419
144635
Actinomycetota
TGG
Pro
>WENV183309960
OLVL01000425
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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