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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183315365
OLVS01000001
119661
Verrucomicrobiota
CAA
Leu
>WENV183315391
OLVS01000003
155256
Verrucomicrobiota
TCT
Arg
>WENV183315390
OLVS01000003
246701
Verrucomicrobiota
TTT
Lys
>WENV183315420
OLVS01000010
345141
Verrucomicrobiota
TTG
Gln
>WENV183315445
OLVS01000021
345133
Verrucomicrobiota
GAC
Val
>WENV183315417
OLVS01000008
82054
Verrucomicrobiota
GTA
Tyr
>WENV183315503
OLVS01000058
246677
Verrucomicrobiota
CTT
Lys
>WENV183315412
OLVS01000007
344844
Verrucomicrobiota
GCA
Cys
>WENV183315367
OLVS01000001
155264
Verrucomicrobiota
GGG
Pro
>WENV183315421
OLVS01000010
344845
Verrucomicrobiota
CTG
Gln
>WENV183315447
OLVS01000021
128202
Verrucomicrobiota
GTC
Asp
>WENV183315490
OLVS01000045
128202
Verrucomicrobiota
GTC
Asp
>WENV183315368
OLVS01000001
414625
Verrucomicrobiota
CCC
Gly
>WENV183315406
OLVS01000007
46246
Verrucomicrobiota
TGA
Ser
>WENV183315366
OLVS01000001
97755
Verrucomicrobiota
TAG
Leu
>WENV183315408
OLVS01000007
246700
Verrucomicrobiota
TTC
Glu
>WENV183315413
OLVS01000007
246700
Verrucomicrobiota
TTC
Glu
>WENV183315415
OLVS01000007
246687
Verrucomicrobiota
CGC
Ala
>WENV183315369
OLVS01000001
419909
Verrucomicrobiota
TCC
Gly
>WENV183315423
OLVS01000010
344841
Verrucomicrobiota
CAC
Val
>WENV183315373
OLVS01000001
82056
Verrucomicrobiota
TAA
Leu
>WENV183315502
OLVS01000058
344842
Verrucomicrobiota
CGT
Thr
>WENV183315676
OLVS01000221
170105
Verrucomicrobiota
CAT
Met
>WENV183315496
OLVS01000050
287733
Verrucomicrobiota
CCA
Trp
>WENV183315414
OLVS01000007
345123
Verrucomicrobiota
TGT
Thr
>WENV183315372
OLVS01000001
345110
Verrucomicrobiota
CCT
Arg
>WENV183315409
OLVS01000007
344839
Verrucomicrobiota
GTG
His
>WENV183315516
OLVS01000068
7274
Verrucomicrobiota
CGA
Ser
>WENV183315374
OLVS01000001
246260
Verrucomicrobiota
>WENV183315504
OLVS01000058
155268
Verrucomicrobiota
CGG
Pro
>WENV183315411
OLVS01000007
82181
Verrucomicrobiota
AAG
Leu
>WENV183315370
OLVS01000001
246728
Verrucomicrobiota
GAA
Phe
>WENV183315808
OLVS01000600
7256
Verrucomicrobiota
GCT
Ser
>WENV183315405
OLVS01000007
345115
Verrucomicrobiota
CAT
Met
>WENV183315446
OLVS01000021
345119
Verrucomicrobiota
TAC
Val
>WENV183315416
OLVS01000008
345124
Verrucomicrobiota
GTT
Asn
>WENV183315489
OLVS01000045
17023
Verrucomicrobiota
GGA
Ser
>WENV183315407
OLVS01000007
368497
Verrucomicrobiota
GCC
Gly
>WENV183315625
OLVS01000162
368497
Verrucomicrobiota
GCC
Gly
>WENV183315689
OLVS01000252
345142
Verrucomicrobiota
CCG
Arg
>WENV183315410
OLVS01000007
246709
Verrucomicrobiota
CAT
Met
>WENV183315371
OLVS01000001
154693
Verrucomicrobiota
TGG
Pro
>WENV183315495
OLVS01000050
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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