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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183323829
OLVY01000908
95987
Bacteroidota
CAA
Leu
>WENV183323471
OLVY01000023
339412
Bacteroidota
GGT
Thr
>WENV183324603
OLVY01027273
235102
Bacteroidota
CGT
Thr
>WENV183324445
OLVY01012751
153993
Bacteroidota
GAT
Ile
>WENV183324435
OLVY01012322
339341
Bacteroidota
GGT
Thr
>WENV183324640
OLVY01032139
58715
Bacteroidota
GAG
Leu
>WENV183324111
OLVY01003084
46165
Bacteroidota
TGA
Ser
>WENV183324486
OLVY01015308
338486
Bacteroidota
CAT
Met
>WENV183323590
OLVY01000165
413663
Bacteroidota
CTG
Gln
>WENV183323755
OLVY01000583
415410
Bacteroidota
TTG
Gln
>WENV183323472
OLVY01000023
237797
Bacteroidota
CCA
Trp
>WENV183324639
OLVY01032139
59689
Bacteroidota
CAG
Leu
>WENV183323697
OLVY01000425
412479
Bacteroidota
TTG
Gln
>WENV183324260
OLVY01006407
237247
Bacteroidota
TTT
Lys
>WENV183323508
OLVY01000069
147147
Bacteroidota
GTG
His
>WENV183323509
OLVY01000069
147147
Bacteroidota
GTG
His
>WENV183323906
OLVY01001267
344692
Bacteroidota
GGT
Thr
>WENV183323551
OLVY01000117
145504
Bacteroidota
TGT
Thr
>WENV183323487
OLVY01000034
235203
Bacteroidota
TTT
Lys
>WENV183324110
OLVY01003084
238121
Bacteroidota
CTT
Lys
>WENV183323976
OLVY01001704
338132
Bacteroidota
GCA
Cys
>WENV183323868
OLVY01001063
37076
Bacteroidota
TAA
Leu
>WENV183324594
OLVY01025845
58714
Bacteroidota
CAA
Leu
>WENV183324080
OLVY01002583
149691
Bacteroidota
GTT
Asn
>WENV183324534
OLVY01018956
144656
Bacteroidota
GTG
His
>WENV183324676
OLVY01037477
235207
Bacteroidota
CAT
Met
>WENV183324155
OLVY01003763
144596
Bacteroidota
GGC
Ala
>WENV183323817
OLVY01000855
344769
Bacteroidota
CTC
Glu
>WENV183324434
OLVY01012322
80614
Bacteroidota
>WENV183323998
OLVY01001807
95559
Bacteroidota
TAG
Leu
>WENV183323975
OLVY01001689
144655
Bacteroidota
GGC
Ala
>WENV183324141
OLVY01003566
144639
Bacteroidota
GGC
Ala
>WENV183324873
OLVY01080943
338164
Bacteroidota
TTC
Glu
>WENV183324094
OLVY01002770
95875
Bacteroidota
TAG
Leu
>WENV183323437
OLVY01000006
240012
Bacteroidota
CCC
Gly
>WENV183324196
OLVY01004645
44852
Bacteroidota
TAA
Leu
>WENV183324252
OLVY01006064
150485
Bacteroidota
GTT
Asn
>WENV183323669
OLVY01000378
342206
Bacteroidota
TTC
Glu
>WENV183323859
OLVY01001046
146764
Bacteroidota
GTC
Asp
>WENV183323860
OLVY01001046
146764
Bacteroidota
GTC
Asp
>WENV183323642
OLVY01000275
96124
Bacteroidota
TAG
Leu
>WENV183324209
OLVY01004812
16224
Bacteroidota
GGA
Ser
>WENV183324047
OLVY01002184
16220
Bacteroidota
GGA
Ser
>WENV183324195
OLVY01004645
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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