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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183341109
OLWM01000457
196621
Bacillota
GTC
Asp
>WENV183341203
OLWM01001294
144612
Bacillota
TCT
Arg
>WENV183341006
OLWM01000097
235134
Bacillota
GAA
Phe
>WENV183341111
OLWM01000458
235098
Bacillota
GAC
Val
>WENV183341176
OLWM01001020
235098
Bacillota
GAC
Val
>WENV183341305
OLWM01004042
23769
Bacillota
TAA
Leu
>WENV183341066
OLWM01000253
44854
Bacillota
TGA
Ser
>WENV183341089
OLWM01000317
37071
Bacillota
TGA
Ser
>WENV183341179
OLWM01001037
304022
Bacillota
GCC
Gly
>WENV183341490
OLWM01026151
246023
Bacillota
TGC
Ala
>WENV183341459
OLWM01020542
307003
Bacillota
TGC
Ala
>WENV183340957
OLWM01000019
59312
Bacillota
CAG
Leu
>WENV183340962
OLWM01000029
338147
Bacillota
CTC
Glu
>WENV183340976
OLWM01000046
338147
Bacillota
CTC
Glu
>WENV183340996
OLWM01000084
338147
Bacillota
CTC
Glu
>WENV183341174
OLWM01000987
235114
Bacillota
TTT
Lys
>WENV183341400
OLWM01012261
429429
Bacillota
CCA
Trp
>WENV183340955
OLWM01000019
44859
Bacillota
AAG
Leu
>WENV183340956
OLWM01000019
44859
Bacillota
AAG
Leu
>WENV183341216
OLWM01001537
11034
Bacillota
GGA
Ser
>WENV183341178
OLWM01001037
235079
Bacillota
GAA
Phe
>WENV183341048
OLWM01000211
338149
Bacillota
CTC
Glu
>WENV183341143
OLWM01000759
245298
Bacillota
CGG
Pro
>WENV183341421
OLWM01014965
287000
Bacillota
GTT
Asn
>WENV183341489
OLWM01026151
201704
Bacillota
GAT
Ile
>WENV183341007
OLWM01000097
240017
Bacillota
GCC
Gly
>WENV183341114
OLWM01000493
411547
Bacillota
CTG
Gln
>WENV183341142
OLWM01000759
411547
Bacillota
CTG
Gln
>WENV183341517
OLWM01035401
147684
Bacillota
ACG
Arg
>WENV183341067
OLWM01000253
4624
Bacillota
GCT
Ser
>WENV183341004
OLWM01000097
263765
Bacillota
TAC
Val
>WENV183341110
OLWM01000457
235095
Bacillota
GGT
Thr
>WENV183341271
OLWM01002808
419639
Bacillota
GCA
Cys
>WENV183341249
OLWM01002367
411549
Bacillota
TTG
Gln
>WENV183340963
OLWM01000031
235142
Bacillota
CTT
Lys
>WENV183341122
OLWM01000564
235142
Bacillota
CTT
Lys
>WENV183341267
OLWM01002695
148188
Bacillota
CCG
Arg
>WENV183341153
OLWM01000853
80612
Bacillota
GTA
Tyr
>WENV183341220
OLWM01001686
235127
Bacillota
TTT
Lys
>WENV183341135
OLWM01000673
235124
Bacillota
TGG
Pro
>WENV183341516
OLWM01034958
338129
Bacillota
TGT
Thr
>WENV183341465
OLWM01021152
292519
Bacillota
CAT
Met
>WENV183341043
OLWM01000199
144583
Bacillota
ACG
Arg
>WENV183341061
OLWM01000240
247734
Bacillota
TGC
Ala
>WENV183341108
OLWM01000457
235171
Bacillota
CCA
Trp
>WENV183341355
OLWM01007769
238974
Bacillota
GAA
Phe
>WENV183341049
OLWM01000211
144621
Bacillota
GTT
Asn
>WENV183341173
OLWM01000987
235113
Bacillota
GAA
Phe
>WENV183341466
OLWM01021152
243098
Bacillota
GGT
Thr
>WENV183341152
OLWM01000853
58712
Bacillota
CAG
Leu
>WENV183341205
OLWM01001294
58712
Bacillota
CAG
Leu
>WENV183341121
OLWM01000552
245296
Bacillota
CCC
Gly
>WENV183341298
OLWM01003706
272992
Bacillota
CTT
Lys
>WENV183341233
OLWM01001860
144594
Bacillota
CAC
Val
>WENV183341010
OLWM01000100
95563
Bacillota
GTA
Tyr
>WENV183341219
OLWM01001686
272488
Bacillota
GAA
Phe
>WENV183341069
OLWM01000258
338131
Bacillota
GCC
Gly
>WENV183341190
OLWM01001133
338128
Bacillota
TTC
Glu
>WENV183341493
OLWM01027314
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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