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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183351111
OLWY01000385
196621
Bacillota
GTC
Asp
>WENV183351036
OLWY01000126
235134
Bacillota
GAA
Phe
>WENV183351439
OLWY01013072
339890
Bacillota
TTG
Gln
>WENV183351122
OLWY01000466
235098
Bacillota
GAC
Val
>WENV183351391
OLWY01009482
44854
Bacillota
TGA
Ser
>WENV183351116
OLWY01000433
37071
Bacillota
TGA
Ser
>WENV183351114
OLWY01000430
304022
Bacillota
GCC
Gly
>WENV183351515
OLWY01028666
246023
Bacillota
TGC
Ala
>WENV183350959
OLWY01000008
59312
Bacillota
CAG
Leu
>WENV183351448
OLWY01013855
238910
Bacillota
CTT
Lys
>WENV183350990
OLWY01000035
338147
Bacillota
CTC
Glu
>WENV183350999
OLWY01000042
338147
Bacillota
CTC
Glu
>WENV183351015
OLWY01000081
338147
Bacillota
CTC
Glu
>WENV183351540
OLWY01035344
235150
Bacillota
TGC
Ala
>WENV183351272
OLWY01002579
429429
Bacillota
CCA
Trp
>WENV183350957
OLWY01000008
44859
Bacillota
AAG
Leu
>WENV183350958
OLWY01000008
44859
Bacillota
AAG
Leu
>WENV183351169
OLWY01000679
11034
Bacillota
GGA
Ser
>WENV183351093
OLWY01000334
338149
Bacillota
CTC
Glu
>WENV183351208
OLWY01001156
245298
Bacillota
CGG
Pro
>WENV183351493
OLWY01022391
37269
Bacillota
TGA
Ser
>WENV183351351
OLWY01007058
413152
Bacillota
TCC
Gly
>WENV183351514
OLWY01028666
201704
Bacillota
GAT
Ile
>WENV183351037
OLWY01000126
240017
Bacillota
GCC
Gly
>WENV183351133
OLWY01000518
411547
Bacillota
CTG
Gln
>WENV183351392
OLWY01009482
4624
Bacillota
GCT
Ser
>WENV183351034
OLWY01000126
263765
Bacillota
TAC
Val
>WENV183351265
OLWY01002269
18852
Bacillota
GCT
Ser
>WENV183351109
OLWY01000385
235095
Bacillota
GGT
Thr
>WENV183351112
OLWY01000385
235095
Bacillota
GGT
Thr
>WENV183351160
OLWY01000642
411549
Bacillota
TTG
Gln
>WENV183351082
OLWY01000274
235142
Bacillota
CTT
Lys
>WENV183351128
OLWY01000495
235142
Bacillota
CTT
Lys
>WENV183351327
OLWY01005254
148188
Bacillota
CCG
Arg
>WENV183351194
OLWY01000964
80612
Bacillota
GTA
Tyr
>WENV183351440
OLWY01013072
235127
Bacillota
TTT
Lys
>WENV183351437
OLWY01013072
147674
Bacillota
TCT
Arg
>WENV183351232
OLWY01001498
235124
Bacillota
TGG
Pro
>WENV183351193
OLWY01000964
338129
Bacillota
TGT
Thr
>WENV183351312
OLWY01003884
292519
Bacillota
CAT
Met
>WENV183351062
OLWY01000193
144583
Bacillota
ACG
Arg
>WENV183351110
OLWY01000385
235171
Bacillota
CCA
Trp
>WENV183351397
OLWY01010034
238974
Bacillota
GAA
Phe
>WENV183351267
OLWY01002369
144621
Bacillota
GTT
Asn
>WENV183351242
OLWY01001567
235113
Bacillota
GAA
Phe
>WENV183351313
OLWY01003884
243098
Bacillota
GGT
Thr
>WENV183351303
OLWY01003619
58712
Bacillota
CAG
Leu
>WENV183351199
OLWY01001015
245296
Bacillota
CCC
Gly
>WENV183351094
OLWY01000334
272992
Bacillota
CTT
Lys
>WENV183351416
OLWY01011293
344240
Bacillota
GCC
Gly
>WENV183351357
OLWY01007386
196632
Bacillota
GTC
Asp
>WENV183351154
OLWY01000626
144594
Bacillota
CAC
Val
>WENV183351016
OLWY01000087
95563
Bacillota
GTA
Tyr
>WENV183351273
OLWY01002608
272488
Bacillota
GAA
Phe
>WENV183350975
OLWY01000018
338131
Bacillota
GCC
Gly
>WENV183351080
OLWY01000255
338128
Bacillota
TTC
Glu
>WENV183351358
OLWY01007386
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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